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sw_4_scaffold_270

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_270_1

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2..433
DNA (432bp) protein (144aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4K9_HALJB
mandelate racemase/muconate lactonizing enzyme family protein
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS07017.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_4_scaffold_270_2

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comp(814..1680)
DNA (867bp) protein (289aa)
Creatininase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8W7_SPHTD
Marine sediment metagenome DNA, contig: S12H4_L00651 {ECO:0000313|EMBL:GAI78609.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Creatininase
sw_4_scaffold_270_3
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(1881..3035)
DNA (1155bp) protein (385aa)
Putative galactonate dehydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I354_CALAS
putative galactonate dehydratase
Putative galactonate dehydratase {ECO:0000313|EMBL:BAL99691.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (str
sw_4_scaffold_270_4
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3097..4269)
DNA (1173bp) protein (391aa)
ABC transporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JBK3_9EURY
ABC transporter {ECO:0000313|EMBL:EMA06477.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
ABC transporter
sw_4_scaffold_270_5
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4472..5314)
DNA (843bp) protein (281aa)
ABC transporter integral membrane protein n=2 Tax=Haloferax RepID=M0II01_9EURY
ABC transporter integral membrane protein {ECO:0000313|EMBL:ELZ96406.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfu
carbohydrate ABC transporter membrane protein 2, CUT1 family
sw_4_scaffold_270_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5317..6264)
DNA (948bp) protein (316aa)
Binding-protein-dependent transporter inner membrane component n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC59_9EURY
Binding-protein-dependent transporter inner membrane component {ECO:0000313|EMBL:EMA54265.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
hypothetical protein
sw_4_scaffold_270_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6415..7968)
DNA (1554bp) protein (518aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8Q8_9EURY
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EMA54266.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
sw_4_scaffold_270_8

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comp(8178..9440)
DNA (1263bp) protein (421aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP64_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS04375.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
mandelate racemase/muconate lactonizing protein
sw_4_scaffold_270_9

Not on your lists

comp(9587..10483)
DNA (897bp) protein (299aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
sw_4_scaffold_270_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10655..11878)
DNA (1224bp) protein (408aa)
Galactonate dehydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6X8_9EURY
Galactonate dehydratase {ECO:0000313|EMBL:EMA41552.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
galactonate dehydratase
sw_4_scaffold_270_11
unknown

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comp(11830..12012)
DNA (183bp) protein (61aa)

This feature has no annotations

sw_4_scaffold_270_12
unknown

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comp(12246..12524)
DNA (279bp) protein (93aa)

This feature has no annotations

sw_4_scaffold_270_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12593..13753
DNA (1161bp) protein (387aa)
Thermosome n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8I0_9EURY
Thermosome {ECO:0000313|EMBL:EMA54267.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
thermosome
sw_4_scaffold_270_14
unknown

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14284..15033
DNA (750bp) protein (250aa)

This feature has no annotations

sw_4_scaffold_270_15
unknown

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15130..15531
DNA (402bp) protein (134aa)

This feature has no annotations

sw_4_scaffold_270_16
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15616..16389)
DNA (774bp) protein (258aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3D5_9EURY
Aldolase {ECO:0000313|EMBL:KDE56937.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sw_4_scaffold_270_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16560..17576)
DNA (1017bp) protein (339aa)
Ketol-acid reductoisomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA38_HALJB
ketol-acid reductoisomerase
Ketol-acid reductoisomerase {ECO:0000313|EMBL:ADJ14560.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeo
sw_4_scaffold_270_18
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(17775..18893)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037CF3E5
hypothetical protein Tax=RBG_16_NC10_65_8_curated
mandelate racemase/muconate lactonizing protein
sw_4_scaffold_270_19
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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19337..19741
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AAV9_9EURY
PilT protein domain-containing protein
sw_4_scaffold_270_20
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20156..21433
DNA (1278bp) protein (426aa)
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ6_9EURY
2-oxoacid dehydrogenase {ECO:0000313|EMBL:AHG04111.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
2-oxo acid dehydrogenase
sw_4_scaffold_270_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21475..22440
DNA (966bp) protein (322aa)
Transketolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N964_9EURY
Transketolase {ECO:0000313|EMBL:EMA54421.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
2-oxoisovalerate dehydrogenase
sw_4_scaffold_270_22
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22579..23493
DNA (915bp) protein (305aa)
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ8_9EURY
Dienelactone hydrolase {ECO:0000313|EMBL:AHG04109.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
branched-chain alpha-keto acid dehydrogenase subunit E2
sw_4_scaffold_270_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23499..24008
DNA (510bp) protein (170aa)
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBZ8_9EURY
Dienelactone hydrolase {ECO:0000313|EMBL:AHG04109.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
branched-chain alpha-keto acid dehydrogenase subunit E2
sw_4_scaffold_270_24
unknown

Not on your lists

comp(24038..25225)
DNA (1188bp) protein (396aa)

This feature has no annotations

sw_4_scaffold_270_25
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(25379..26413)
DNA (1035bp) protein (345aa)
Phosphate uptake regulator PhoU n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W2Q1_9EURY
regulatory protein
Phosphate uptake regulator PhoU {ECO:0000313|EMBL:ELY43735.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidif
sw_4_scaffold_270_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26588..27658)
DNA (1071bp) protein (357aa)
ATP-NAD kinase (EC:2.7.1.23)
ATP-NAD kinase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VHL9_HALJB
ATP-NAD kinase {ECO:0000313|EMBL:ELY36579.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain
sw_4_scaffold_270_27
unknown

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27813..27953
DNA (141bp) protein (47aa)

This feature has no annotations

sw_4_scaffold_270_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27999..28691)
DNA (693bp) protein (231aa)
Molybdopterin binding domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR11_9EURY
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:ELZ24324.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
molybdopterin binding domain-containing protein
sw_4_scaffold_270_29
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28802..29797)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X576_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56601.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_4_scaffold_270_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30184..31158
DNA (975bp) protein (325aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BG98_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERI71195.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
hypothetical protein
Displaying items 1-30 of 36 in total

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