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sw_5_scaffold_3879

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3879_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..142
DNA (141bp) protein (47aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD90_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227455 species="Arc
tif2g; translation initiation factor IF-2 subunit gamma
sw_5_scaffold_3879_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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139..525
DNA (387bp) protein (129aa)
Putative RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE3_9EURY
Putative RNA-binding protein {ECO:0000313|EMBL:EMA55176.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
putative RNA-binding protein
sw_5_scaffold_3879_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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525..1097
DNA (573bp) protein (191aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EMA43703.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA43703.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoE'; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE0_9EURY
sw_5_scaffold_3879_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1100..1297
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG84_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_5_scaffold_3879_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1299..1919
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB27_9EURY
UPF0218 protein C450_03877 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
conserved hypothetical protein (DUF359)
sw_5_scaffold_3879_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2164..3063
DNA (900bp) protein (300aa)
Aldo/keto reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD61_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA43707.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
aldo/keto reductase
sw_5_scaffold_3879_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3152..3478
DNA (327bp) protein (109aa)
30S ribosomal protein S24e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDK2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
30S ribosomal protein S24e
sw_5_scaffold_3879_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3475..3609
DNA (135bp) protein (45aa)
30S ribosomal protein S27ae n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG89_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
30S ribosomal protein S27Ae
sw_5_scaffold_3879_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4340..5227
DNA (888bp) protein (296aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB22_9EURY
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
sw_5_scaffold_3879_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5259..5528
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43711.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_3879_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5565..6218
DNA (654bp) protein (218aa)
nucleoside-triphosphatase (EC:3.6.1.15)
Ditpase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEP5_9EURY
Ditpase {ECO:0000313|EMBL:EMA55165.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
sw_5_scaffold_3879_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6301..6822
DNA (522bp) protein (174aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF1_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA43713.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
N-acetyltransferase GCN5
sw_5_scaffold_3879_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7127..7480
DNA (354bp) protein (118aa)
Putative cytoplasmic protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR09_9EURY
Putative cytoplasmic protein {ECO:0000313|EMBL:ELZ25661.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
putative cytoplasmic protein
sw_5_scaffold_3879_14
unknown

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7653..7961
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 14 items

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