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sw_5_scaffold_358

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_358_1
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1131)
DNA (1131bp) protein (377aa)
Acyl-CoA dehydrogenase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRL1_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ85754.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.
acd; acyl-CoA dehydrogenase
sw_5_scaffold_358_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1500..2555
DNA (1056bp) protein (352aa)
phytoene/squalene synthetase (EC:2.5.1.21)
Squalene/phytoene synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI68_9EURY
Squalene/phytoene synthase {ECO:0000313|EMBL:EMA45391.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
sw_5_scaffold_358_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2835..3917)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0M920_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41109.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_358_4
unknown

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comp(3914..4162)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_5_scaffold_358_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4211..5638)
DNA (1428bp) protein (476aa)
Flavin-dependent dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQN2_HALBP
flavin-dependent dehydrogenase
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:ADQ66720.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
sw_5_scaffold_358_6
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5790..7205
DNA (1416bp) protein (472aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZNV9_9EURY
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ELY88019.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanen
NADH:flavin oxidoreductase
sw_5_scaffold_358_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7368..7934)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45467.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
glycine-rich protein
sw_5_scaffold_358_8

Not on your lists

8308..9606
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XSJ0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03046.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
PA-phosphatase-like phosphoesterase
sw_5_scaffold_358_9

Not on your lists

9566..9880
DNA (315bp) protein (105aa)
PAP2 superfamily protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWU7_9ARCH
PAP2 superfamily protein {ECO:0000313|EMBL:ESS03047.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
phosphoesterase PA-phosphatase-like protein
sw_5_scaffold_358_10
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9961..11340)
DNA (1380bp) protein (460aa)
nucleotidyltransferase/DNA polymerase involved in DNA repair; K04479 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] id=24617751 bin=Halonotius_J07HN4 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1070774 species="Archaea; Euryarchaeota; Halo
nucleotidyltransferase/DNA polymerase
sw_5_scaffold_358_11
unknown

Not on your lists

comp(11504..12043)
DNA (540bp) protein (180aa)

This feature has no annotations

sw_5_scaffold_358_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12273..12515
DNA (243bp) protein (81aa)
hypothetical protein id=24614959 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88468.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_5_scaffold_358_13

Not on your lists

comp(12577..13605)
DNA (1029bp) protein (343aa)
Threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:AEN06953.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AEN06953.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Threonine ammonia-lyase n=1 Tax=halophilic archaeon DL31 RepID=G2MN24_9ARCH
sw_5_scaffold_358_14
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13666..14403)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WLA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50244.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
permease
sw_5_scaffold_358_15
unknown

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comp(14518..14631)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_5_scaffold_358_16
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14632..15027)
DNA (396bp) protein (132aa)
ArsR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGS9_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ33927.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
ArsR family transcriptional regulator
sw_5_scaffold_358_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15160..15606
DNA (447bp) protein (149aa)
N-acetyltransferase GCN5 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5U6_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELZ30850.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
N-acetyltransferase GCN5
sw_5_scaffold_358_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15755..17224
DNA (1470bp) protein (490aa)
Zn-dependent protease-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEH3_9EURY
Zn-dependent protease-like protein {ECO:0000313|EMBL:ELZ33870.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
zn-dependent protease-like protein
sw_5_scaffold_358_19
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17241..18365)
DNA (1125bp) protein (375aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGC9_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ33868.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
sw_5_scaffold_358_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18366..19427)
DNA (1062bp) protein (354aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGL3_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ33867.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
sw_5_scaffold_358_21
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19424..20404)
DNA (981bp) protein (327aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTJ0_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ65935.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY23091.1}; TaxID=4
sw_5_scaffold_358_22
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20409..21386)
DNA (978bp) protein (326aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTI9_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ65934.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY23090.1}; TaxID=4
sw_5_scaffold_358_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21451..23184)
DNA (1734bp) protein (578aa)
Extracellular solute-binding protein, family 5 n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTI8_HALBP
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ADQ65933.1}; Flags: Precursor;; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometri
ABC transporter substrate-binding protein
sw_5_scaffold_358_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23471..24841
DNA (1371bp) protein (457aa)
peptidase M28 id=24614952 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Peptidase M28 {ECO:0000313|EMBL:ESP88461.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrel
peptidase M28
sw_5_scaffold_358_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24959..26248)
DNA (1290bp) protein (430aa)
Indole-3-acetyl-L-aspartic acid hydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVF0_9EURY
Indole-3-acetyl-L-aspartic acid hydrolase {ECO:0000313|EMBL:EFW91472.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
amidohydrolase
sw_5_scaffold_358_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26582..27049
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7D6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53019.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_358_27
unknown

Not on your lists

26988..27167
DNA (180bp) protein (60aa)

This feature has no annotations

sw_5_scaffold_358_28
unknown

Not on your lists

27790..28071
DNA (282bp) protein (94aa)

This feature has no annotations

sw_5_scaffold_358_29
unknown

Not on your lists

28294..28473
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 29 items

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