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sw_5_scaffold_425

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_425_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..222
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEY1_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EJN58761.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_5_scaffold_425_2
unknown

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comp(451..684)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_5_scaffold_425_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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810..1187
DNA (378bp) protein (126aa)
Gluconolactonase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NP37_9EURY
gnl; gluconolactonase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
gnl; gluconolactonase
sw_5_scaffold_425_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1253..2419
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXI8_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ27930.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
mandelate racemase/muconate lactonizing protein
sw_5_scaffold_425_5
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2474..3940
DNA (1467bp) protein (489aa)
glutamyl-tRNA amidotransferase subunit A id=24625673 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERG97781.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
glutamyl-tRNA amidotransferase subunit A
sw_5_scaffold_425_6
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3993..4358)
DNA (366bp) protein (122aa)
Rieske (2Fe-2S) iron-sulfur domain-containing protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XP02_9EURY
Rieske (2Fe-2S) iron-sulfur domain-containing protein {ECO:0000313|EMBL:ELY63287.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natr
Rieske (2Fe-2S) iron-sulfur domain protein
sw_5_scaffold_425_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4361..5440)
DNA (1080bp) protein (360aa)
Amidohydrolase 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFE5_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EMA56546.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
amidohydrolase 2
sw_5_scaffold_425_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5494..7227
DNA (1734bp) protein (578aa)
Transporter, major facilitator family subfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB30_9EURY
Transporter, major facilitator family subfamily protein {ECO:0000313|EMBL:EMA54309.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
transporter, major facilitator family subfamily
sw_5_scaffold_425_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7230..7559)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AY74_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCD02833.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum b
sw_5_scaffold_425_10
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7556..8932)
DNA (1377bp) protein (459aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas sp. 313 RepID=UPI000312A213
ABC transporter substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CDY75667.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathe
sw_5_scaffold_425_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8996..9604)
DNA (609bp) protein (203aa)
HpcH/HpaI aldolase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG9_9EURY
Aldolase {ECO:0000313|EMBL:AHG02996.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_425_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9889..10710)
DNA (822bp) protein (274aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J3JHA2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EJN60814.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NAD-dependent epimerase/dehydratase
sw_5_scaffold_425_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10897..11823
DNA (927bp) protein (309aa)
Dihydrodipicolinate synthetase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8U6_9EURY
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EMA54311.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
dihydrodipicolinate synthetase
sw_5_scaffold_425_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11893..12354)
DNA (462bp) protein (154aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BYE1_9EURY
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ELZ15433.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena
thiamine pyrophosphate protein domain protein TPP-binding protein
Displaying 14 items

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