ggKbase home page

sw_7_scaffold_1048

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1048_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..266)
-----------------
DNA (264bp)
protein (88aa)
UspA domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBU4_9EURY
UspA domain protein {ECO:0000313|EMBL:EMA43247.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
universal stress protein A (UpsA) domain protein
sw_7_scaffold_1048_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

637..1314
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N075_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50050.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_1048_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1318..1770)
-----------------
DNA (453bp)
protein (151aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43249.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_1048_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1853..2398
-----------------
DNA (546bp)
protein (182aa)
Dipeptide ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWF7_9EURY
Dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA50052.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
oligopeptide/dipeptide ABC transporter, ATPase subunit
sw_7_scaffold_1048_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2419..4611
-----------------
DNA (2193bp)
protein (731aa)
Dipeptide ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KUV3_9EURY
Dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA25092.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloa
peptide ABC transporter ATP-binding protein
sw_7_scaffold_1048_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4671..6512
-----------------
DNA (1842bp)
protein (614aa)
Family 5 extracellular solute-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYM8_9EURY
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:ELZ27748.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
family 5 extracellular solute-binding protein
sw_7_scaffold_1048_7
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6721..7749
-----------------
DNA (1029bp)
protein (343aa)
Dipeptide ABC transporter permease n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V091_HALMA
dppB1; dipeptide ABC transporter permease
Dipeptide ABC transporter permease {ECO:0000313|EMBL:AAV47062.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marism
sw_7_scaffold_1048_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7746..8759
-----------------
DNA (1014bp)
protein (338aa)
Dipeptide transport system permease dppC n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWZ1_9EURY
Dipeptide transport system permease dppC {ECO:0000313|EMBL:ELZ27751.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
oppC1; oligopeptide transport system permease OppC
sw_7_scaffold_1048_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8766..9110
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49784.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_1048_10
unknown

Not on your lists

comp(9171..9431)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

sw_7_scaffold_1048_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9538..9825)
-----------------
DNA (288bp)
protein (96aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobac
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFP1_9EURY
sw_7_scaffold_1048_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10326..10526
-----------------
DNA (201bp)
protein (67aa)
hypothetical protein, partial n=1 Tax=Halococcus hamelinensis RepID=UPI00029B4966
sw_7_scaffold_1048_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10709..11089)
-----------------
DNA (381bp)
protein (127aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49786.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying 13 items

View Taxonomy