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sw_9_scaffold_446

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_446_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..959)
DNA (957bp) protein (319aa)
htlB; HTR-like protein id=24645725 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative membrane protein {ECO:0000313|EMBL:ERH09943.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_446_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1036..1494)
DNA (459bp) protein (153aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8D8_HALJP
sw_9_scaffold_446_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1764..2783
DNA (1020bp) protein (340aa)
Uroporphyrinogen decarboxylase {ECO:0000256|RuleBase:RU000554}; EC=4.1.1.37 {ECO:0000256|RuleBase:RU000554};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="ha
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] id=24644729 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
uroporphyrinogen decarboxylase (EC:4.1.1.37)
sw_9_scaffold_446_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2833..5718
DNA (2886bp) protein (962aa)
Signal-transducing histidine kinase/response regulator n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C0Q0_9EURY
Signal-transducing histidine kinase/response regulator {ECO:0000313|EMBL:ELZ16785.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source=
htlD; HTR-like protein
sw_9_scaffold_446_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6302..7477)
DNA (1176bp) protein (392aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_0032
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI3_9EURY
sw_9_scaffold_446_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7999..11079
DNA (3081bp) protein (1027aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11212.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_9_scaffold_446_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11164..11808)
DNA (645bp) protein (215aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK56_9EURY
sw_9_scaffold_446_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11885..13189)
DNA (1305bp) protein (435aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1227455 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBM1_9EURY
sw_9_scaffold_446_9
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

13311..13730
DNA (420bp) protein (140aa)
Peroxiredoxin OsmC {ECO:0000313|EMBL:CCQ89921.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CCQ89921.1};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" s
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000369FB1E
osmC; osmotically inducible protein C
sw_9_scaffold_446_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13771..14421)
DNA (651bp) protein (217aa)
Transcriptional regulator, MarR family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRZ1_HALUD
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV13166.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
sw_9_scaffold_446_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14475..15644)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TJ51_HALHI
Uncharacterized protein {ECO:0000313|EMBL:EMA20200.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_9_scaffold_446_12
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15735..16463)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0JXQ9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26262.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_9_scaffold_446_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16518..16877
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IY83_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA01003.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_9_scaffold_446_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16931..17824
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L698_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28648.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_9_scaffold_446_trna_1
unknown

Not on your lists

comp(17990..18062)
DNA (73bp)
transferRNA
sw_9_scaffold_446_15
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18146..19540
DNA (1395bp) protein (465aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264, ECO:0000313|EMBL:EMA01708.1};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRN
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J031_9EURY
sw_9_scaffold_446_16
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19576..20328)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA20937.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
3-isopropylmalate dehydratase
sw_9_scaffold_446_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20334..20516)
DNA (183bp) protein (61aa)
H/ACA RNA-protein complex component Nop10p n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J0K4_9EURY
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
zn-ribbon RNA-binding protein
sw_9_scaffold_446_18
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20542..21405)
DNA (864bp) protein (288aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWG7_HALVA
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=662477 species="Arch
translation initiation factor IF-2
sw_9_scaffold_446_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21402..21575)
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPB9_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
30S ribosomal protein S27E
sw_9_scaffold_446_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21578..21859)
DNA (282bp) protein (94aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=24646602 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44e
sw_9_scaffold_446_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21976..22503
DNA (528bp) protein (176aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW67_HALMD
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ACV48196.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
sw_9_scaffold_446_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22507..22845)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21125.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_446_23
unknown

Not on your lists

comp(22830..23057)
DNA (228bp) protein (76aa)

This feature has no annotations

sw_9_scaffold_446_24
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23131..23376)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0S4_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA01948.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
sw_9_scaffold_446_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23403..23921)
DNA (519bp) protein (173aa)
HoxA-like transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP64_9EURY
HoxA-like transcriptional regulator {ECO:0000313|EMBL:ELZ23669.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
HoxA transcriptional regulator
sw_9_scaffold_446_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23999..24769)
DNA (771bp) protein (257aa)
Carboxylesterase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRE4_9EURY
Carboxylesterase {ECO:0000313|EMBL:ELZ24957.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
carboxylesterase
sw_9_scaffold_446_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24916..27339
DNA (2424bp) protein (808aa)
ATPase AAA (EC:3.6.4.3)
Cell division control protein 48/AAA family ATPase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSW9_9EURY
Cell division control protein 48/AAA family ATPase {ECO:0000313|EMBL:ELZ24959.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
sw_9_scaffold_446_28
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27533..28669
DNA (1137bp) protein (379aa)
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N9K6_9EURY
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC {ECO:0000313|EMBL:EMA53789.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
phaC; poly(R)-hydroxyalkanoic acid synthase, class III, subunit PhaC
sw_9_scaffold_446_29
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28718..29074
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I6D4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49525.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
Displaying 30 items

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