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S28_scaffold_773_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_773_curated_1
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..340)
DNA (339bp) protein (113aa)
D-lactate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH91_METAC
FAD/FMN-containing dehydrogenase
FAD/FMN-containing dehydrogenase {ECO:0000313|EMBL:AKB73284.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
S28_scaffold_773_curated_2
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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675..2597
DNA (1923bp) protein (641aa)
archaeosine tRNA-ribosyltransferase type 2 (EC:2.4.2.-)
Archaeosine tRNA-ribosyltransferase type 2 {ECO:0000313|EMBL:AKB73283.1}; EC=2.4.2.- {ECO:0000313|EMBL:AKB73283.1};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
Archaeosine tRNA-ribosyltransferase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH90_METAC rbh
S28_scaffold_773_curated_3
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2600..3286
DNA (687bp) protein (229aa)
Ribosomal-protein-S18p-alanine acetyltransferase {ECO:0000313|EMBL:AKB20294.1}; EC=2.3.1.- {ECO:0000313|EMBL:AKB20294.1};; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
Ribosomal-protein-S18p-alanine acetyltransferase n=2 Tax=Methanosarcina mazei RepID=M1Q363_METMZ rbh
Ribosomal-protein-S18p-alanine acetyltransferase rbh
S28_scaffold_773_curated_4
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3270..3548)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH88_METAC
hypothetical protein
Metal-binding protein {ECO:0000313|EMBL:KKG26516.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
S28_scaffold_773_curated_5
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3911..4192)
DNA (282bp) protein (94aa)
DNA primase (EC:2.7.7.-)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
DNA primase DnaG n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=DNAG_METAC
S28_scaffold_773_curated_6
unknown

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comp(6990..7097)
DNA (108bp) protein (36aa)

This feature has no annotations

S28_scaffold_773_curated_7
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7177..8643
DNA (1467bp) protein (489aa)
NADH dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH86_METAC rbh
NADH dehydrogenase {ECO:0000313|EMBL:KKH96526.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
hypothetical protein
S28_scaffold_773_curated_8
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8707..8874
DNA (168bp) protein (56aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
RNA 3'-terminal phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q368_METMZ
Displaying 8 items

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