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13_1_40cm_4_scaffold_1987

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1987_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1..435
DNA (435bp) protein (145aa)
50S ribosomal protein L14 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036B9A97
50S ribosomal protein L14P Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L14P
13_1_40cm_4_scaffold_1987_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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446..808
DNA (363bp) protein (121aa)
50S ribosomal protein L24P n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNP8_ACIS0
ribosomal protein L24p/L26e, archaeal/eukaryotic
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_1987_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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813..1538
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003630352
30S ribosomal protein S4e Tax=RBG_16_Euryarchaeota_68_12_curated
rps4e; 30S ribosomal protein S4e
13_1_40cm_4_scaffold_1987_4

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1535..2053
DNA (519bp) protein (173aa)
50S ribosomal protein L5 n=1 Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YQQ9_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L5P
13_1_40cm_4_scaffold_1987_5
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2050..2196
DNA (147bp) protein (49aa)
30S ribosomal protein S14 type Z n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8Y0_9EURY
rps14P; 30S ribosomal protein S14P Tax=RBG_16_Euryarchaeota_68_12_curated
rps14P; 30S ribosomal protein S14P
13_1_40cm_4_scaffold_1987_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2205..2594
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D309E
SSU ribosomal protein S15Ae (S8p) Tax=RBG_16_Euryarchaeota_68_12_curated
rps8p; 30S ribosomal protein S8P
13_1_40cm_4_scaffold_1987_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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2603..3148
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000372DEA1
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RBG_16_Euryarchaeota_68_12_curated
50S ribosomal protein L6
13_1_40cm_4_scaffold_1987_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3153..4025
DNA (873bp) protein (291aa)
50S ribosomal protein L32e n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T860_9EURY
ribosomal protein L32E Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl32e; 50S ribosomal protein L32e
13_1_40cm_4_scaffold_1987_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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4025..4492
DNA (468bp) protein (156aa)
50S ribosomal protein L19e n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BI70_9EURY
LSU ribosomal protein L19E Tax=RBG_16_Euryarchaeota_68_13_curated
LSU ribosomal protein L19e
13_1_40cm_4_scaffold_1987_10

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4489..4992
DNA (504bp) protein (168aa)
50S ribosomal protein L18 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D4605
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
13_1_40cm_4_scaffold_1987_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


4994..5836
DNA (843bp) protein (281aa)
30S ribosomal protein S5 n=2 Tax=Euryarchaeota RepID=M9SL02_9EURY
rps5p; 30S ribosomal protein S5P Tax=RBG_16_Euryarchaeota_67_27_curated
SSU ribosomal protein S2e (S5p)
13_1_40cm_4_scaffold_1987_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


5833..6294
DNA (462bp) protein (154aa)
50S ribosomal protein L30P n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=RL30_METHJ
ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rpl30p; 50S ribosomal protein L30
13_1_40cm_4_scaffold_1987_13

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6295..6729
DNA (435bp) protein (145aa)
LSU ribosomal protein L27Ae (L15p) n=2 Tax=Euryarchaeota RepID=M9SFD2_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
LSU ribosomal protein L27Ae (L15p)
13_1_40cm_4_scaffold_1987_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

6743..8338
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036005F0
preprotein translocase SecY Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
preprotein translocase, SecY subunit
13_1_40cm_4_scaffold_1987_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8343..8888)
DNA (546bp) protein (182aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_40cm_4_scaffold_1987_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(8925..9425)
DNA (501bp) protein (167aa)
Sulfonate/nitrate transport system ATP-binding protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLE4_MOOTA
sulfonate/nitrate transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
sulfonate/nitrate transport system ATP-binding protein
13_1_40cm_4_scaffold_1987_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(9482..9760)
DNA (279bp) protein (93aa)
ABC transporter, ATP-binding protein n=2 Tax=mine drainage metagenome RepID=T0YL31_9ZZZZ
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC transporter
13_1_40cm_4_scaffold_1987_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(9705..10238)
DNA (534bp) protein (178aa)
ABC transporter related n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V222_ROSS1
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_68_13_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_1987_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10240..11934)
DNA (1695bp) protein (565aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RLF0_MOOTA
binding-protein dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
binding-protein dependent transport system inner membrane protein
13_1_40cm_4_scaffold_1987_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11994..12263)
DNA (270bp) protein (90aa)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Ornithine carbamoyltransferase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI43_PYRYC
ornithine carbamoyltransferase
Displaying 20 items

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