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13_1_40cm_4_scaffold_2247

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2247_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(66..1211)
DNA (1146bp) protein (382aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2247_2
unknown

Not on your lists

comp(1866..2066)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_4_scaffold_2247_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2264..2518
DNA (255bp) protein (85aa)
cytochrome C biogenesis protein transmembrane region Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2247_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2531..4003)
DNA (1473bp) protein (491aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RBG_16_Euryarchaeota_68_12_curated
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0T7_METMA
13_1_40cm_4_scaffold_2247_5
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4142..6952)
DNA (2811bp) protein (937aa)
Kelch repeat type 1-containing protein Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
Cytochrome C family protein id=4892986 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
peptidase S8/S53 subtilisin kexin sedolisin
13_1_40cm_4_scaffold_2247_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(7164..8579)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6G1_ACISM
PE-PGRS family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_40cm_4_scaffold_2247_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(8707..11469)
DNA (2763bp) protein (921aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037A5ECC
PE-PGRS family protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PE-PGRS family protein
13_1_40cm_4_scaffold_2247_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11578..12843)
DNA (1266bp) protein (422aa)
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L029_9BACT
histidinol-phosphate phosphatase family protein
13_1_40cm_4_scaffold_2247_9
unknown

Not on your lists

comp(12959..13261)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_4_scaffold_2247_10
unknown

Not on your lists

13806..14429
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_4_scaffold_2247_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

14426..15712
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003821D54
tRNA N6-threonylcarbamoyladenosine 2-methylthiotransferase Tax=RBG_16_Euryarchaeota_68_12_curated
2-methylthioadenine synthetase
13_1_40cm_4_scaffold_2247_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

15709..16740
DNA (1032bp) protein (344aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2247_trna_1
unknown

Not on your lists

16791..16863
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_2247_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(16861..17067)
DNA (207bp) protein (69aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2247_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

17120..17338
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9N6_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2247_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17330..19291)
DNA (1962bp) protein (654aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EA70C
7-cyano-7-deazaguanine tRNA-ribosyltransferase Tax=RBG_16_Euryarchaeota_67_27_curated
7-cyano-7-deazaguanine tRNA-ribosyltransferase
13_1_40cm_4_scaffold_2247_16
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

19399..20166
DNA (768bp) protein (256aa)
UPI0003D1AA2E related cluster n=1 Tax=unknown RepID=UPI0003D1AA2E
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2247_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

20206..20544
DNA (339bp) protein (113aa)
hypothetical protein n=3 Tax=Archaea RepID=UPI00038280C6
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Euryarchaeota_67_27_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_4_scaffold_2247_18
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(20549..20902)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMB5_DESK7
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2247_19

Not on your lists

comp(20947..21273)
DNA (327bp) protein (109aa)
Marine sediment metagenome DNA, contig: S06H3_S15003 {ECO:0000313|EMBL:GAI45414.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_4_scaffold_2247_20
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21312..22028)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_16_Euryarchaeota_68_12_curated
circadian clock protein, KaiC
13_1_40cm_4_scaffold_2247_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22151..22756
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK33_ACIS0
hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
Protein of unknown function (DUF1616)
13_1_40cm_4_scaffold_2247_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

22753..23136
DNA (384bp) protein (128aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Thermococcus sp. CL1 RepID=I3ZS83_9EURY
peptidyl-tRNA hydrolase Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_40cm_4_scaffold_2247_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

23138..23710
DNA (573bp) protein (191aa)
UPF0215 protein MBGDN05_00652 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T434_9EURY
hypothetical protein; K09120 hypothetical protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2247_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


comp(23713..24750)
DNA (1038bp) protein (346aa)
Protein pelota homolog n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7R6_9EURY
putative cell division protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
putative cell division protein
13_1_40cm_4_scaffold_2247_25
unknown

Not on your lists

24864..25031
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_4_scaffold_2247_26
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(25216..26448)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036DC8F0
translation initiation factor IF-2 subunit gamma Tax=RBG_16_Euryarchaeota_68_12_curated
translation initiation factor IF-2 subunit gamma
13_1_40cm_4_scaffold_2247_27
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

comp(26531..27070)
DNA (540bp) protein (180aa)
isoprenylcysteine carboxyl methyltransferase Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
13_1_40cm_4_scaffold_2247_28
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(27235..27621)
DNA (387bp) protein (129aa)
30S ribosomal protein S6e n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK77_ACIS0
ribosomal protein S6E (S10) Tax=RBG_16_Euryarchaeota_68_12_curated
ribosomal protein S6E (S10)
13_1_40cm_4_scaffold_2247_29
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(27683..28909)
DNA (1227bp) protein (409aa)
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Euryarchaeota_68_12_curated
Cysteine--tRNA ligase n=1 Tax=Thermococcus sp. AM4 RepID=B7R1M2_9EURY
cysteinyl-tRNA synthetase
Displaying items 1-30 of 31 in total

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