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DS1215_scaffold_15

Alias: DS1215_Halomonas_54_144_12

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Displaying items 1-30 of 82 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DS1215_scaffold_15_1
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131..1282)
DNA (1152bp) protein (384aa)
lldD; L-lactate dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] Tax=DS1215_Halomonas_54_146
lldD; lactate dehydrogenase (EC:1.1.2.3) rbh
L-lactate dehydrogenase n=2 Tax=Halomonas RepID=F7STE2_9GAMM
DS1215_scaffold_15_2
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1582..2355
DNA (774bp) protein (258aa)
Transcription regulator HTH, GntR n=4 Tax=Halomonas RepID=L9U5N8_9GAMM
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=DS1215_Halomonas_54_146
regulatory protein GntR HTH
DS1215_scaffold_15_3
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2439..4259
DNA (1821bp) protein (607aa)
histidine kinase (EC:2.7.13.3); K10125 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] Tax=DS1215_Halomonas_54_146
Histidine kinase n=3 Tax=Halomonas RepID=G4FBJ9_9GAMM
integral membrane sensor signal transduction histidine kinase
DS1215_scaffold_15_4
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4252..5634
DNA (1383bp) protein (461aa)
Two component, sigma54 specific, Fis family transcriptional regulator n=5 Tax=Halomonas RepID=F7STE5_9GAMM
two-component system NarL family, C4-dicarboxylate transport response regulator DctD; K10126 two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD Tax=DS1215_Halomonas_
two component, sigma54 specific, transcriptional regulator, Fis family
DS1215_scaffold_15_5
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5610..6281)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Halomonas RepID=L9U5F3_9GAMM
hypothetical protein Tax=DS1215_Halomonas_54_146
Protein of unknown function DUF457, transmembrane
DS1215_scaffold_15_6
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6410..6955)
DNA (546bp) protein (182aa)
Anhydrase n=4 Tax=Halomonas RepID=G4FBK2_9GAMM
anhydrase Tax=DS1215_Halomonas_54_146
transferase hexapeptide repeat containing protein rbh
DS1215_scaffold_15_7
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7037..8377)
DNA (1341bp) protein (447aa)
Transporter n=4 Tax=Halomonas RepID=G9EAY6_9GAMM
sodium symporter; K03308 neurotransmitter:Na+ symporter, NSS family Tax=DS1215_Halomonas_54_146
sodium:neurotransmitter symporter
DS1215_scaffold_15_8
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8574..8672
DNA (99bp) protein (33aa)
Tax=DS1215_Halomonas_54_146
DS1215_scaffold_15_9
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8680..10728
DNA (2049bp) protein (683aa)
prlC; oligopeptidase A (EC:3.4.24.70); K01414 oligopeptidase A [EC:3.4.24.70] Tax=DS1215_Halomonas_54_146
Oligopeptidase A (EC:3.4.24.70)
Peptidase M3A/M3B, thimet/oligopeptidase F n=3 Tax=Halomonas RepID=L9U5P2_9GAMM
DS1215_scaffold_15_10
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10790..11041
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=2 Tax=Halomonas RepID=G4FBK5_9GAMM
hypothetical protein; K07070 Tax=DS1215_Halomonas_54_146
Conserved hypothetical protein CHP02443
DS1215_scaffold_15_11
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11396..12382
DNA (987bp) protein (329aa)
TRAP transporter solute receptor TAXI family protein n=4 Tax=Halomonas RepID=G4FBK6_9GAMM
TRAP transporter solute receptor TAXI family protein Tax=DS1215_Halomonas_54_146
TRAP transporter solute receptor, TAXI family
DS1215_scaffold_15_12
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12488..14689
DNA (2202bp) protein (734aa)
TRAP transporter 4TM/12TM fusion protein n=5 Tax=Halomonas RepID=G4FBK7_9GAMM
TRAP transporter, 4TM/12TM fusion protein Tax=DS1215_Halomonas_54_146
TRAP transporter, 4TM/12TM fusion protein
DS1215_scaffold_15_13
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14793..15635)
DNA (843bp) protein (281aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20] Tax=DS1215_Halomonas_54_146
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=5 Tax=Halomonas RepID=F7STF4_9GAMM
DS1215_scaffold_15_14
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15778..16713
DNA (936bp) protein (312aa)
Auxin efflux carrier n=3 Tax=Halomonas RepID=L9U696_9GAMM
hypothetical protein; K07088 Tax=DS1215_Halomonas_54_146
Auxin Efflux Carrier
DS1215_scaffold_15_15
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16858..18534)
DNA (1677bp) protein (559aa)
ligB; NAD-dependent DNA ligase LigB (EC:6.5.1.2) Tax=DS1215_Halomonas_54_146
DNA ligase B n=1 Tax=Halomonas boliviensis LC1 RepID=G9EAZ5_9GAMM
NAD-dependent DNA ligase adenylation
DS1215_scaffold_15_16
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18869..19240
DNA (372bp) protein (124aa)
Tax=DS1215_Halomonas_54_146
DS1215_scaffold_15_17
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19289..19618
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C7H2_9XANT
hypothetical protein Tax=DS1215_Halomonas_54_146
hypothetical protein
DS1215_scaffold_15_18
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19700..20482
DNA (783bp) protein (261aa)
Uncharacterized protein n=5 Tax=Alphaproteobacteria RepID=G9ADD3_RHIFH
hypothetical protein Tax=DS1215_Halomonas_54_146
hypothetical protein
DS1215_scaffold_15_19
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20469..23975
DNA (3507bp) protein (1169aa)
Dead/deah box helicase domain protein n=6 Tax=Alphaproteobacteria RepID=B6JAA9_OLICO
DEAD/DEAH box helicase Tax=DS1215_Halomonas_54_146
DEAD/DEAH box helicase
DS1215_scaffold_15_20
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24028..25161
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BSZ1_DELAS
hypothetical protein Tax=DS1215_Halomonas_54_146
hypothetical protein
DS1215_scaffold_15_21
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25228..25446)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE8_BURGS
hypothetical protein Tax=DS1215_Halomonas_54_146
conjugal transfer protein
DS1215_scaffold_15_22
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25443..26732)
DNA (1290bp) protein (430aa)
Conjugation TrbI family protein n=15 Tax=Proteobacteria RepID=F4GG85_ALIDK
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 Tax=DS1215_Halomonas_54_146
conjugative transfer protein TrbI
DS1215_scaffold_15_23
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26735..27727)
DNA (993bp) protein (331aa)
Conjugal transfer protein n=14 Tax=Proteobacteria RepID=Q1LN35_RALME
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 Tax=DS1215_Halomonas_54_146
conjugal transfer protein TrbG
DS1215_scaffold_15_24
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27724..28428)
DNA (705bp) protein (235aa)
Conjugal transfer protein n=42 Tax=Proteobacteria RepID=A1TK45_ACIAC
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 Tax=DS1215_Halomonas_54_146
conjugal transfer protein TrbF
DS1215_scaffold_15_25
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28447..29814)
DNA (1368bp) protein (456aa)
Conjugative transfer protein TrbL n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKA8_STEMA
conjugal transfer protein TrbL Tax=DS1215_Halomonas_54_146
conjugal transfer protein TrbL
DS1215_scaffold_15_26
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29827..30570)
DNA (744bp) protein (248aa)
Conjugative transfer protein TrbJ n=16 Tax=Proteobacteria RepID=I1YGU1_METFJ
conjugal transfer protein TrbJ Tax=DS1215_Halomonas_54_146
putative conjugal transfer TrbJ signal peptide protein
DS1215_scaffold_15_27
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30582..33029)
DNA (2448bp) protein (816aa)
AAA ATPase n=27 Tax=Proteobacteria RepID=A9AED1_BURM1
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 Tax=DS1215_Halomonas_54_146
conjugal transfer ATPase TrbE
DS1215_scaffold_15_28
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33042..33326)
DNA (285bp) protein (95aa)
P-type conjugative transfer protein TrbD n=10 Tax=Proteobacteria RepID=C1DR59_AZOVD
trbD; P-type conjugative transfer protein TrbD; K03198 type IV secretion system protein VirB3 Tax=DS1215_Halomonas_54_146
trbD; P-type conjugative transfer protein TrbD
DS1215_scaffold_15_29
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33323..33700)
DNA (378bp) protein (126aa)
Conjugal transfer protein TrbC n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKZ7_9BURK
trbC; Conjugative transfer protein TrbC Tax=DS1215_Halomonas_54_146
trbC; Conjugative transfer protein TrbC
DS1215_scaffold_15_30
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33697..34743)
DNA (1047bp) protein (349aa)
Type II secretion system protein E n=8 Tax=Proteobacteria RepID=A0KUP7_SHESA
type II secretion system protein E; K03196 type IV secretion system protein VirB11 Tax=DS1215_Halomonas_54_146
type II secretion system protein E
Displaying items 1-30 of 82 in total

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