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DS1215_scaffold_39

Alias: DS1215_Halomonas_54_144_28

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DS1215_scaffold_39_1
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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207..2129
DNA (1923bp) protein (641aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=DS1215_Halomonas_54_146
Threonine--tRNA ligase n=3 Tax=Halomonas RepID=F7SRD3_9GAMM
threonyl-tRNA synthetase rbh
DS1215_scaffold_39_2
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2190..2681
DNA (492bp) protein (164aa)
Translation initiation factor IF-3 n=7 Tax=Halomonas RepID=E1VCP4_HALED
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=DS1215_Halomonas_54_146
Translation initiation factor IF-3
DS1215_scaffold_39_3
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2764..2958
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=8 Tax=Gammaproteobacteria RepID=RL35_CHRSD
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=DS1215_Halomonas_54_146
50S ribosomal protein L35
DS1215_scaffold_39_4

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3023..3376
DNA (354bp) protein (118aa)
50S ribosomal protein L20 n=2 Tax=Halomonas RepID=G4F5A2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN83922.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L20
DS1215_scaffold_39_5
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3540..4559
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=DS1215_Halomonas_54_146
Phenylalanine--tRNA ligase alpha subunit n=4 Tax=Halomonas RepID=F7SRD7_9GAMM
Phenylalanyl-tRNA synthetase alpha chain
DS1215_scaffold_39_6
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4586..6967
DNA (2382bp) protein (794aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=DS1215_Halomonas_54_146
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Halomonas RepID=G4F5A0_9GAMM
Phenylalanyl-tRNA synthetase beta chain
DS1215_scaffold_39_7
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7083..7382
DNA (300bp) protein (100aa)
Integration host factor subunit alpha n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J0N3_9GAMM
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=DS1215_Halomonas_54_146
integration host factor subunit alpha
DS1215_scaffold_39_8
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7540..7746)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=3 Tax=Halomonas RepID=G9EH07_9GAMM
hypothetical protein Tax=DS1215_Halomonas_54_146
Protein of unknown function DUF2788
DS1215_scaffold_39_9
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7890..8354
DNA (465bp) protein (155aa)
Flavodoxin/nitric oxide synthase n=3 Tax=Halomonas RepID=L9U8G9_9GAMM
flavodoxin/nitric oxide synthase Tax=DS1215_Halomonas_54_146
flavodoxin/nitric oxide synthase
DS1215_scaffold_39_10
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8358..8735
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Halomonas boliviensis LC1 RepID=G9EH05_9GAMM
hypothetical protein Tax=DS1215_Halomonas_54_146
hypothetical protein
DS1215_scaffold_39_11
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9004..10356
DNA (1353bp) protein (451aa)
tig; trigger factor (EC:5.2.1.8); K03545 trigger factor Tax=DS1215_Halomonas_54_146
Trigger factor n=5 Tax=Halomonas RepID=L9U823_9GAMM
Trigger factor
DS1215_scaffold_39_12
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10424..11041
DNA (618bp) protein (206aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=DS1215_Halomonas_54_146
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Halomonas RepID=F7SRE4_9GAMM
Clp protease ClpP rbh
DS1215_scaffold_39_13
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11116..12396
DNA (1281bp) protein (427aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=5 Tax=Halomonas RepID=F7SRE5_9GAMM
clpX; ATP-dependent protease ATP-binding subunit; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=DS1215_Halomonas_54_146
ATP-dependent Clp protease ATP-binding subunit clpX
DS1215_scaffold_39_14
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12529..14955
DNA (2427bp) protein (809aa)
Lon-A peptidase; K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=DS1215_Halomonas_54_146
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=5 Tax=Halomonas RepID=L9U7W8_9GAMM
DS1215_scaffold_39_15
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15150..15422
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=5 Tax=Halomonas RepID=F7SRE7_9GAMM
hupB; DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta Tax=DS1215_Halomonas_54_146
transcriptional regulator HU subunit alpha
DS1215_scaffold_39_16
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15548..17368
DNA (1821bp) protein (607aa)
ppiD; PpiC-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=DS1215_Halomonas_54_146
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Halomonas sp. HAL1 RepID=G4F3J6_9GAMM
hypothetical protein
DS1215_scaffold_39_17
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17478..18254)
DNA (777bp) protein (259aa)
lpxH; UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-); K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] Tax=DS1215_Halomonas_54_146
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Halomonas sp. HAL1 RepID=G4F3J7_9GAMM
UDP-2,3-diacylglucosamine hydrolase
DS1215_scaffold_39_18
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18268..18768)
DNA (501bp) protein (167aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=DS1215_Halomonas_54_146
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Halomonas RepID=G4F3J8_9GAMM
peptidyl-prolyl cis-trans isomerase cyclophilin type
DS1215_scaffold_39_19
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18740..18862)
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=2 Tax=Halomonas RepID=F7SRF1_9GAMM
Putative uncharacterized protein Tax=DS1215_Halomonas_54_146
hypothetical protein
DS1215_scaffold_39_20
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18924..20603
DNA (1680bp) protein (560aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18] Tax=DS1215_Halomonas_54_146
Glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=5 Tax=Halomonas RepID=F7SRF2_9GAMM
DS1215_scaffold_39_21
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20610..22028
DNA (1419bp) protein (473aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=DS1215_Halomonas_54_146
Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=3 Tax=Halomonas RepID=G4F3K1_9GAMM
DS1215_scaffold_39_22
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22163..23089
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. HAL1 RepID=G4F3K2_9GAMM
yehZ; hypothetical protein; K05845 osmoprotectant transport system substrate-binding protein Tax=DS1215_Halomonas_54_146
ABC-type glycine betaine transport, periplasmic subunit
DS1215_scaffold_39_23
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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23162..24361
DNA (1200bp) protein (400aa)
Putative osmoprotectant uptake system permease protein yehY n=1 Tax=Halomonas boliviensis LC1 RepID=G9EGZ2_9GAMM
ABC transporter permease; K05846 osmoprotectant transport system permease protein Tax=DS1215_Halomonas_54_146
ABC-type transporter, integral membrane subunit
DS1215_scaffold_39_24
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24358..25323
DNA (966bp) protein (322aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter ATP-binding protein n=2 Tax=Halomonas RepID=G4F3K4_9GAMM
ABC transporter ATP-binding protein; K05847 osmoprotectant transport system ATP-binding protein Tax=DS1215_Halomonas_54_146
DS1215_scaffold_39_25
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25316..26098
DNA (783bp) protein (261aa)
ABC transporter permease n=1 Tax=Halomonas sp. HAL1 RepID=G4F3K5_9GAMM
ABC transporter permease; K05846 osmoprotectant transport system permease protein Tax=DS1215_Halomonas_54_146
ABC-type transporter, integral membrane subunit
DS1215_scaffold_39_26
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26248..27453
DNA (1206bp) protein (402aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] Tax=DS1215_Halomonas_54_146
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=3 Tax=Halomonas RepID=G4F3K6_9GAMM
DS1215_scaffold_39_27
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27455..28432
DNA (978bp) protein (326aa)
transketolase (EC:1.2.4.4); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=DS1215_Halomonas_54_146
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4)
Transketolase, central region n=5 Tax=Halomonas RepID=F7SRF9_9GAMM
DS1215_scaffold_39_28
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28471..29748
DNA (1278bp) protein (426aa)
dihydrolipoamide acetyltransferase (EC:2.3.1.12); K09699 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] Tax=DS1215_Halomonas_54_146
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC:2.3.1.168)
Lipoamide Acyltransferase n=1 Tax=Halomonas titanicae BH1 RepID=L9U7X2_9GAMM
DS1215_scaffold_39_29
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29771..31639
DNA (1869bp) protein (623aa)
serine/threonine protein kinase (EC:2.7.11.1); K08282 non-specific serine/threonine protein kinase [EC:2.7.11.1] Tax=DS1215_Halomonas_54_146
Serine/threonine protein kinase n=3 Tax=Halomonas RepID=G4F3K9_9GAMM
serine/threonine protein kinase
DS1215_scaffold_39_30
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31759..32388)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. HAL1 RepID=G4F3L0_9GAMM
hypothetical protein Tax=DS1215_Halomonas_54_146
protein of unknown function DUF330
Displaying items 1-30 of 42 in total

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