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13_1_40cm_3_scaffold_222

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_222_1
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(307..1665)
DNA (1359bp) protein (453aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ACR80329.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ACR80329.1};; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source=
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=2 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=B5M6M9_KOSOT
13_1_40cm_3_scaffold_222_2
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(1662..2744)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_3_scaffold_222_3
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3161..4306
DNA (1146bp) protein (382aa)
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HIR9_PYRSN
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase {ECO:0000313|EMBL:AEC51118.1}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyro
13_1_40cm_3_scaffold_222_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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4303..5244
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI000362A8E6 rbh
dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
dehydrogenase
13_1_40cm_3_scaffold_222_5
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5281..6201)
DNA (921bp) protein (307aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] Tax=RBG_13_Deltaproteobacteria_61_14_curated
2-dehydropantoate 2-reductase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC11_HELMI
panE; 2-dehydropantoate 2-reductase
13_1_40cm_3_scaffold_222_6
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6206..7087)
DNA (882bp) protein (294aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=CG_Desulfarul_01
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0V6_DESRM
13_1_40cm_3_scaffold_222_7
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(7078..7830)
DNA (753bp) protein (251aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000313|EMBL:ABO07819.1}; EC=6.3.2.1 {ECO:0000313|EMBL:ABO07819.1};; TaxID=410359 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobac
Pantothenate synthetase n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MT52_PYRCJ
13_1_40cm_3_scaffold_222_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(7827..8714)
DNA (888bp) protein (296aa)
Putative GHMP kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase Tax=RBG_13_Bathyarchaeota_46_16b_curated
GHMP kinase
13_1_40cm_3_scaffold_222_9
RBG_16_Archaea_50_20_curated, Archaea

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8862..9902
DNA (1041bp) protein (347aa)
Gcd1.2; nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Archaea_50_20_curated
Nucleotidyl transferase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VT03_THESW
nucleotidyltransferase
13_1_40cm_3_scaffold_222_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9925..11280
DNA (1356bp) protein (452aa)
pgm-1; alpha-phosphoglucomutase / phosphomannomutase (EC:5.4.2.8 5.4.2.2); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_13_Bathyarchaeota_38_9_curated
Phosphomannomutase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TA45_9ARCH
phosphoglucosamine mutase
13_1_40cm_3_scaffold_222_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(11880..12677)
DNA (798bp) protein (266aa)
Marine sediment metagenome DNA, contig: S03H2_S30297 Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_3_scaffold_222_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12714..12977)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein
13_1_40cm_3_scaffold_222_13
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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comp(13221..13484)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KFM19932.1}; TaxID=1503183 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
13_1_40cm_3_scaffold_222_14
unknown

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13646..14011
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_3_scaffold_222_15
Arthrobacter globiformis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14018..14785
DNA (768bp) protein (256aa)
glycosyltransferase (EC:2.4.1.-)
UPI0003D7A328 related cluster n=1 Tax=unknown RepID=UPI0003D7A328
Putative hydrolase {ECO:0000313|EMBL:GAB13008.1}; TaxID=1077972 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter globiformis NBRC 12137.;"
13_1_40cm_3_scaffold_222_16
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14810..15742
DNA (933bp) protein (311aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVW9_ROSS1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ90772.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ros
13_1_40cm_3_scaffold_222_17
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

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15898..16605
DNA (708bp) protein (236aa)
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MDH4_CALMQ
nucleotidyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
nucleotidyl transferase
13_1_40cm_3_scaffold_222_18
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

16602..17561
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
NAD-dependent epimerase/dehydratase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JM77_9THEM
NAD-dependent epimerase/dehydratase
13_1_40cm_3_scaffold_222_19
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

17602..18705
DNA (1104bp) protein (368aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN70046.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylotherm
13_1_40cm_3_scaffold_222_20
unknown

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19661..19909
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_3_scaffold_222_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(19918..20850)
DNA (933bp) protein (311aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
tfb1; transcription initiation factor IIB
Displaying 21 items

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