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13_1_40cm_3_scaffold_2445

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2445_1
RBG_16_Archaea_50_20_curated, Archaea

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comp(3..1499)
DNA (1497bp) protein (499aa)
putative ATP-dependent helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_16_Archaea_50_20_curated
Lhr-like helicase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KV59_METHD
Lhr-like helicase
13_1_40cm_3_scaffold_2445_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(1580..1990)
DNA (411bp) protein (137aa)
Glycine cleavage system H protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMF3_9FIRM
gcsH4; glycine cleavage system protein H; K02437 glycine cleavage system H protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_2445_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(2128..2688)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D595_9ARCH
NT5C domain containing protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_2445_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2750..3379
DNA (630bp) protein (210aa)
Nitroreductase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKQ6_9ARCH
Nitroreductase {ECO:0000313|EMBL:EGG42065.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limni
nitroreductase
13_1_40cm_3_scaffold_2445_5
unknown

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3934..4137
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_3_scaffold_2445_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4504..5049
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z8H2_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_2445_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5049..6023
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RZ05_THEPD
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_3_scaffold_2445_8
RBG_16_Archaea_50_20_curated, Archaea

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6167..6745
DNA (579bp) protein (193aa)
RNA-binding protein, containing S1 domain n=2 Tax=Methanosarcina mazei RepID=M1QJY3_METMZ
RNA binding protein; K07573 exosome complex component CSL4 Tax=RBG_16_Archaea_50_20_curated
RNA-binding protein, containing S1 domain
13_1_40cm_3_scaffold_2445_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6742..7035
DNA (294bp) protein (98aa)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_3_scaffold_2445_10
Prevotella sp. oral taxon 299, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7053..7730
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Prevotella nanceiensis RepID=UPI00036099CA
HAD hydrolase, family IA
HAD hydrolase, family IA {ECO:0000313|EMBL:EFC71051.1}; TaxID=575614 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 299 s
13_1_40cm_3_scaffold_2445_11
RBG_16_Archaea_50_20_curated, Archaea

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7778..8146
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A5J1_THEGJ
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_3_scaffold_2445_12
unknown

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8143..8637
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_3_scaffold_2445_13
RBG_16_Archaea_50_20_curated, Archaea

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8673..8996
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPL5_THELI
DNA-directed RNA polymerase subunit M Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase subunit M
13_1_40cm_3_scaffold_2445_14
RBG_16_Archaea_50_20_curated, Archaea

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9009..9749
DNA (741bp) protein (247aa)
DNA polymerase sliding clamp n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MUU8_PYRCJ
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen Tax=RBG_16_Archaea_50_20_curated
monomeric archaeal DNA polymerase sliding clamp
Displaying 14 items

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