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13_2_20cm_scaffold_1399

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1399_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..1059
DNA (1059bp) protein (353aa)
ATPase AAA-2 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F133_CONWI
ATPase AAA
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ADB50109.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter
13_2_20cm_scaffold_1399_2
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1120..1695)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KIA6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKX60556.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
13_2_20cm_scaffold_1399_3
unknown

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comp(1695..2879)
DNA (1185bp) protein (395aa)

This feature has no annotations

13_2_20cm_scaffold_1399_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3014..4354
DNA (1341bp) protein (447aa)
DNA repair protein radA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F136_CONWI
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter w
13_2_20cm_scaffold_1399_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4329..5483
DNA (1155bp) protein (385aa)
DNA integrity scanning protein DisA n=1 Tax=Patulibacter medicamentivorans RepID=H0E1E1_9ACTN
DNA integrity scanning protein DisA; K07067 DNA integrity scanning protein Tax=RBG_16_Actinobacteria_68_12_curated
DNA integrity scanning protein DisA
13_2_20cm_scaffold_1399_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5647..6171
DNA (525bp) protein (175aa)
Transcriptional regulator, CarD family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F138_CONWI
BadM/Rrf2 family transcriptional regulator; K07736 CarD family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
BadM/Rrf2 family transcriptional regulator
13_2_20cm_scaffold_1399_7
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6284..6949
DNA (666bp) protein (222aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5USV3_TSUPD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_2_20cm_scaffold_1399_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7107..7712
DNA (606bp) protein (202aa)
HisJ family histidinol phosphate phosphatase; K04486 histidinol-phosphatase (PHP family) [EC:3.1.3.15] Tax=RBG_16_Actinobacteria_68_12_curated
histidinol-phosphatase (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4P5_DESAP
13_2_20cm_scaffold_1399_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7709..8194
DNA (486bp) protein (162aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=RBG_16_Actinobacteria_68_12_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3Y1_9BACT
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
13_2_20cm_scaffold_1399_10
unknown

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comp(8178..8450)
DNA (273bp) protein (91aa)

This feature has no annotations

13_2_20cm_scaffold_1399_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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8854..9855
DNA (1002bp) protein (334aa)
Glutamate--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ13_9BACT
glutamyl-tRNA synthetase Tax=RBG_16_Actinobacteria_67_10_curated
glutamyl-tRNA synthetase
13_2_20cm_scaffold_1399_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9842..11137
DNA (1296bp) protein (432aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Actinobacteria_67_10_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1D3_9ACTN
13_2_20cm_scaffold_1399_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11134..11850
DNA (717bp) protein (239aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RBG_16_Actinobacteria_67_10_curated
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F143_CONWI
TrmH family RNA methyltransferase
13_2_20cm_scaffold_1399_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11843..12280
DNA (438bp) protein (146aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_2_20cm_scaffold_1399_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12395..13057
DNA (663bp) protein (221aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_2_20cm_scaffold_1399_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13078..14142
DNA (1065bp) protein (355aa)
Oxidoreductase molybdopterin binding n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KYC9_9ACTO
Oxidoreductase molybdopterin binding {ECO:0000313|EMBL:CCH16576.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lup
molybdopterin binding oxidoreductase
13_2_20cm_scaffold_1399_17
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14139..14594)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WBT0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHD09225.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
13_2_20cm_scaffold_1399_18
unknown

Not on your lists

14842..15264
DNA (423bp) protein (141aa)

This feature has no annotations

13_2_20cm_scaffold_1399_19
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15261..15848
DNA (588bp) protein (196aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RBG_13_Actinobacteria_63_9_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K5_CONWI
13_2_20cm_scaffold_1399_20
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15845..17110)
DNA (1266bp) protein (422aa)
Glycosyltransferase, MGT family id=4213226 bin=GWC2_Chloroflexi_73_18 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
MGT family glycosyltransferase Tax=GWC2_RIF_CHLX_73_18_curated
MGT family glycosyltransferase
13_2_20cm_scaffold_1399_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17107..18063)
DNA (957bp) protein (319aa)
Cys/Met metabolism pyridoxal-phosphate-dependent protein; K01739 cystathionine gamma-synthase [EC:2.5.1.48] Tax=RBG_16_Actinobacteria_68_12_curated
Putative amino acid lyase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6XAS1_9MICO
metB; cystathionine gamma-synthase
13_2_20cm_scaffold_1399_22
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

18118..18669
DNA (552bp) protein (184aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHK4_THET1
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ACZ43225.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain A
13_2_20cm_scaffold_1399_23
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

18636..19028
DNA (393bp) protein (131aa)
Sulfate ABC transporter, periplasmic sulfate-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHK4_THET1
sulfate ABC transporter substrate-binding protein
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:ACZ43225.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain A
13_2_20cm_scaffold_1399_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19018..19848
DNA (831bp) protein (277aa)
Sulfate ABC transporter, inner membrane subunit CysT n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC30_CONWI rbh
sulfate ABC transporter permease
Sulfate ABC transporter, inner membrane subunit CysT {ECO:0000313|EMBL:ADB53325.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacte
13_2_20cm_scaffold_1399_25
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

19838..20005
DNA (168bp) protein (56aa)
Sulfate ABC transporter, inner membrane subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHK6_THET1
sulfate ABC transporter permease
Sulfate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACZ43227.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Displaying 25 items

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