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13_2_20cm_scaffold_1623

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_2_20cm_scaffold_1623_1
unknown

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29..1039
DNA (1011bp) protein (337aa)

This feature has no annotations

13_2_20cm_scaffold_1623_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1036..2238)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNI1_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AFE06090.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_2_20cm_scaffold_1623_3
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(2383..3462)
DNA (1080bp) protein (360aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:ABU58326.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ABU58326.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus
Amidase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLE3_ROSCS
13_2_20cm_scaffold_1623_4
unknown

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comp(3482..3655)
DNA (174bp) protein (58aa)

This feature has no annotations

13_2_20cm_scaffold_1623_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(3652..4836)
DNA (1185bp) protein (395aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) {ECO:0000313|EMBL:ACM06939.1}; EC=2.5.1.- {ECO:0000313|EMBL:ACM06939.1};; TaxID=309801 species="Bacteria; Chloroflexi; Th
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3N1_THERP
13_2_20cm_scaffold_1623_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4829..6379)
DNA (1551bp) protein (517aa)
cytochrome C oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADB50335.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ADB50335.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexiba
Cytochrome c oxidase, subunit I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F355_CONWI rbh
13_2_20cm_scaffold_1623_7
unknown

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6768..7541
DNA (774bp) protein (258aa)

This feature has no annotations

13_2_20cm_scaffold_1623_8
unknown

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7552..7734
DNA (183bp) protein (61aa)

This feature has no annotations

13_2_20cm_scaffold_1623_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7803..8726
DNA (924bp) protein (308aa)
glnQ; glutamine ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JR12_STRRC
ABC transporter-like protein
13_2_20cm_scaffold_1623_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8723..9634
DNA (912bp) protein (304aa)
Putative amino acid ABC transporter periplasmic solute-binding protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DDQ2_9BACI
putative amino acid ABC transporter periplasmic solute-binding protein; K02030 polar amino acid transport system substrate-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
amino acid ABC transporter substrate-binding protein
13_2_20cm_scaffold_1623_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9687..10412
DNA (726bp) protein (242aa)
Putative ABC amino acid transporter permease/substrate-binding protein n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6ZGY9_PSEST
ABC amino acid transporter permease/substrate-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC amino acid transporter permease/substrate-binding protein
13_2_20cm_scaffold_1623_12
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10413..11090
DNA (678bp) protein (226aa)
ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036DA3C7
Uncharacterized protein {ECO:0000313|EMBL:KIF71482.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
ABC transporter permease
13_2_20cm_scaffold_1623_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(11147..12571)
DNA (1425bp) protein (475aa)
integral membrane sensor signal transduction histidine kinase; K07653 two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] Tax=RBG_16_Actinobacteria_67_10_curated
Putative two-component system sensor n=1 Tax=Patulibacter medicamentivorans RepID=H0E9Y0_9ACTN rbh
integral membrane sensor signal transduction histidine kinase
13_2_20cm_scaffold_1623_14
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12568..13254)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J3P5_9PSEU rbh
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EHK81539.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhod
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_2_20cm_scaffold_1623_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13567..14649
DNA (1083bp) protein (361aa)
peptidase S1 n=1 Tax=Patulibacter americanus RepID=UPI0003B5DC35
peptidase S1 and S6 chymotrypsin/Hap Tax=RBG_16_Actinobacteria_68_12_curated
peptidase S1 and S6 chymotrypsin/Hap
13_2_20cm_scaffold_1623_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(15069..16394)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00035D28E0 rbh
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ACZ39099.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" so
13_2_20cm_scaffold_1623_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16447..17859
DNA (1413bp) protein (471aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] Tax=RBG_16_Actinoba
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27); K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] id=14629096 bin=bin8_Chloro species=Meiothermus timidus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin8_Chloro organism_group=Chloroflexi rbh
methylmalonate-semialdehyde dehydrogenase
Displaying 17 items

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