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13_1_40cm_scaffold_3683

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3683_1
unknown

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3..191
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_scaffold_3683_2
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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1087..2508
DNA (1422bp) protein (474aa)
enantiomer-selective amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
amidase (EC:3.5.1.4)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXU3_ROSS1
13_1_40cm_scaffold_3683_3
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

2581..3858
DNA (1278bp) protein (426aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QRT9_SPHPG
carbohydrate ABC transporter substrate-binding protein, CUT1 family; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
sugar ABC transporter periplasmic protein
13_1_40cm_scaffold_3683_4
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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3965..4744
DNA (780bp) protein (260aa)
ABC transporter permease n=1 Tax=Meiothermus timidus RepID=UPI0003708D17
sugar ABC transporter permease Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_3683_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

4744..5577
DNA (834bp) protein (278aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH94_THET1
monosaccharide-transporting ATPase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
binding-protein-dependent transporters inner membrane component
13_1_40cm_scaffold_3683_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5694..6677
DNA (984bp) protein (328aa)
NHL repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein SpalD1_28839 id=3396029 bin=GWC2_Syntrophus__56_31 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_3683_7
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6697..7455
DNA (759bp) protein (253aa)
short-chain alcohol dehydrogenase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain alcohol dehydrogenase
13_1_40cm_scaffold_3683_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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7485..7901
DNA (417bp) protein (139aa)
pyridoxamine 5'-phosphate oxidase-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Pyridoxamine 5'-phosphate oxidase-related FMN-binding id=1863214 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxamine 5'-phosphate oxidase-like protein
13_1_40cm_scaffold_3683_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7927..9225
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J516_NOSP7
hypothetical protein Tax=RBG_16_Betaproteobacteria_64_18_curated
hypothetical protein
13_1_40cm_scaffold_3683_10
unknown

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9430..9690
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_scaffold_3683_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9687..10184
DNA (498bp) protein (166aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_scaffold_3683_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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10445..11158
DNA (714bp) protein (238aa)
ribulose-5-phosphate 4-epimerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6C4
class II aldolase/adducin family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
class II aldolase/adducin family protein
13_1_40cm_scaffold_3683_13
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11106..12722)
DNA (1617bp) protein (539aa)
Putative ethanolamine utilisation protein EutA id=1746305 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
eutA; Ethanolamine utilization protein eutA Tax=GWD2_Deltaproteobacteria_55_8_curated
eutA; Ethanolamine utilization protein eutA
13_1_40cm_scaffold_3683_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

12879..13667
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037DFC68
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_cura
transcriptional regulator
13_1_40cm_scaffold_3683_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13678..17742
DNA (4065bp) protein (1355aa)
ubiD_R; UbiD-like subunit of putative (de) carboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ubiD2; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD2 (EC:4.1.1.-)
UbiD2: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=2065167 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
13_1_40cm_scaffold_3683_16
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

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17739..18353
DNA (615bp) protein (205aa)
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=3212382 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_3683_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18542..18961
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_3683_18
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18958..19578
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPP6_9BACT
hypothetical protein Tax=CG_Delta_02
hypothetical protein
13_1_40cm_scaffold_3683_19
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19921..20877
DNA (957bp) protein (319aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_53_10_curated
Reactivating factor for ethanolamine ammonia lyase id=1839689 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_scaffold_3683_20
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20885..22348
DNA (1464bp) protein (488aa)
UbiD family decarboxylase Tax=RBG_13_Deltaproteobacteria_53_10_curated
UbiD family decarboxylases id=2064952 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UbiD family decarboxylase
13_1_40cm_scaffold_3683_21
unknown

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22787..24091
DNA (1305bp) protein (435aa)

This feature has no annotations

Displaying 21 items

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