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13_1_40cm_scaffold_650

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_650_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..215
DNA (213bp) protein (71aa)
hypothetical protein; K06888 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4996873 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acylglucosamine 2-epimerase
13_1_40cm_scaffold_650_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(323..1006)
DNA (684bp) protein (228aa)
queC; Queuosine biosynthesis protein queC (EC:3.5.-.-) Tax=GWC2_Rokubacteria_70_16_curated
7-cyano-7-deazaguanine synthase id=4493697 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
exsB protein
13_1_40cm_scaffold_650_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(999..1673)
DNA (675bp) protein (225aa)
radical SAM domain-containing protein; K10026 queuosine biosynthesis protein QueE id=14627682 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
radical SAM domain-containing protein; K10026 queuosine biosynthesis protein QueE Tax=CSP1_6_Rokubacteria
radical SAM protein
13_1_40cm_scaffold_650_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1657..2037)
DNA (381bp) protein (127aa)
6-pyruvoyl tetrahydrobiopterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
6-pyruvoyl tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] id=14627681 bin=bin7_NC10_sister species=Robiginitalea biformata genus=Robiginitalea taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_650_5
unknown

Not on your lists

2223..2498
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_scaffold_650_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2517..3947
DNA (1431bp) protein (477aa)
Putative uncharacterized protein id=4793512 bin=GWA2_Methylomirabilis_73_35 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_scaffold_650_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4027..4572
DNA (546bp) protein (182aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4697101 bin=GWC2_Methylomirabilis_70_16 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_650_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5587..5787
DNA (201bp) protein (67aa)
thiS; thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein id=14627029 bin=bin7_NC10_sister species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
sulfur carrier protein ThiS
13_1_40cm_scaffold_650_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5792..6574
DNA (783bp) protein (261aa)
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiazole synthase id=4800301 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiG; thiamine biosynthesis protein ThiG
13_1_40cm_scaffold_650_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6562..7185
DNA (624bp) protein (208aa)
thiE2; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=GWA2_Rokubacteria_73_35_curated
Thiamine-phosphate synthase id=5006705 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tenI; carboxythiazole phosphate tautomerase
13_1_40cm_scaffold_650_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7340..8455
DNA (1116bp) protein (372aa)
glycine oxidase; K03153 glycine oxidase [EC:1.4.3.19] Tax=GWA2_Rokubacteria_70_23_curated
thiO; glycine oxidase ThiO (EC:1.4.3.19)
Putative glycine oxidase id=4584627 bin=GWF2_Methylomirabilis_70_14 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_650_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8452..9780
DNA (1329bp) protein (443aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidohydrolase id=4800307 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
13_1_40cm_scaffold_650_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9785..10588
DNA (804bp) protein (268aa)
ABC transporter periplasmic ligand binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Periplasmic binding protein id=5006709 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fepB; periplasmic-binding protein
13_1_40cm_scaffold_650_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10696..12141
DNA (1446bp) protein (482aa)
tldD; peptidase TldD Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative peptidase TldD id=4888043 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tldD; peptidase TldD
13_1_40cm_scaffold_650_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12138..13484
DNA (1347bp) protein (449aa)
Peptidase U62 id=5006712 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pmbA; protease pmbA; K03592 PmbA protein Tax=GWA2_Rokubacteria_73_35_curated
pmbA; protease pmbA
13_1_40cm_scaffold_650_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13500..14285
DNA (786bp) protein (262aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Deoxyribonuclease id=4888041 bin=GWC2_Methylomirabilis_70_24 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
deoxyribonuclease
13_1_40cm_scaffold_650_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14436..15155
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4800317 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_650_18
unknown

Not on your lists

comp(15156..15842)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_scaffold_650_19
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16001..17275
DNA (1275bp) protein (425aa)
Secretion protein HlyD family protein id=4213646 bin=GWA2_Methylomirabilis_73_35 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
secretion protein HlyD family protein Tax=CSP1_6_Rokubacteria
secretion protein HlyD family protein
13_1_40cm_scaffold_650_20
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17481..19025
DNA (1545bp) protein (515aa)
histidine kinase (EC:2.7.13.3)
Two-component hybrid sensor and regulator n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IDL5_9CHLR
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EFO80723.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris
13_1_40cm_scaffold_650_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(19133..20164)
DNA (1032bp) protein (344aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein MkanA1_05815 id=2589429 bin=GWA2_Methylomirabilis_73_35 species=Hyphomonas neptunium genus=Hyphomonas taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiol-disulfide oxidoreductase domain-containing protein
13_1_40cm_scaffold_650_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20161..20949)
DNA (789bp) protein (263aa)
undecaprenyl pyrophosphate phosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uppP; UDP pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase id=4800320 bin=GWC2_Methylomirabilis_70_16 species=Alishewanella agri genus=Alishewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_650_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

20999..21727
DNA (729bp) protein (243aa)
Molybdopterin binding domain protein id=2419455 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
molybdopterin binding domain-containing protein
13_1_40cm_scaffold_650_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21748..22440
DNA (693bp) protein (231aa)
hypothetical protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI00034B2329
coenzyme PQQ synthesis protein C
13_1_40cm_scaffold_650_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

22450..24180
DNA (1731bp) protein (577aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase family 39 id=2419453 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
13_1_40cm_scaffold_650_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24207..24989
DNA (783bp) protein (261aa)
glycosyl transferase family protein Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase id=2419366 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
13_1_40cm_scaffold_650_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25062..25763)
DNA (702bp) protein (234aa)
putative CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Coenzyme A transferase id=3548792 bin=GWF2_Methylomirabilis_70_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative CoA transferase subunit B
13_1_40cm_scaffold_650_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25787..26272)
DNA (486bp) protein (162aa)
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative CoA transferase, subunit A id=4853986 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
coenzyme A transferase
13_1_40cm_scaffold_650_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(26321..26629)
DNA (309bp) protein (103aa)
Coenzyme A transferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDT5_9FIRM
putative coenzyme A transferase, subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
coenzyme A transferase
13_1_40cm_scaffold_650_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26663..27070)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PC53_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
Displaying items 1-30 of 41 in total

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