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13_1_40cm_scaffold_8999

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_8999_1
unknown

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comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

13_1_40cm_scaffold_8999_2
unknown

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comp(428..634)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_scaffold_8999_3
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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783..1301
DNA (519bp) protein (173aa)
RNA polymerase sigma factor n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC
RNA polymerase sigma24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
13_1_40cm_scaffold_8999_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1309..2106
DNA (798bp) protein (266aa)
Transmembrane transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S9Z1_9BURK
membrane protein
Membrane protein {ECO:0000313|EMBL:AHX12427.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
13_1_40cm_scaffold_8999_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2335..2781
DNA (447bp) protein (149aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SW63_JANMA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_40cm_scaffold_8999_6
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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2822..4456
DNA (1635bp) protein (545aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Acidobacteria_64_8_curated
Oligopeptide ABC transporter substrate-binding protein id=4355654 bin=GWF2_Methylomirabilis_70_14 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_scaffold_8999_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4471..6222
DNA (1752bp) protein (584aa)
xaa-pro dipeptidyl-peptidase, peptidase family s15 (EC:3.4.14.11); K06978 Tax=GWA2_Rokubacteria_70_23_curated
Hydrolase CocE/NonD family protein id=4827668 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S15
13_1_40cm_scaffold_8999_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

6256..6618
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG51_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
13_1_40cm_scaffold_8999_9
unknown

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comp(6524..8134)
DNA (1611bp) protein (537aa)

This feature has no annotations

13_1_40cm_scaffold_8999_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8300..9220
DNA (921bp) protein (307aa)
Dipeptide transport system permease DppB id=4526369 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
glutathione ABC transporter permease
13_1_40cm_scaffold_8999_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9217..10098
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036B24DF
Peptide ABC transporter permease {ECO:0000313|EMBL:ETX08379.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. T
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_8999_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10025..11005)
DNA (981bp) protein (327aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein id=14627353 bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K01989 putative ABC transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_scaffold_8999_13
bacterium YEK0313, Bacteria

Not on your lists

11212..12975
DNA (1764bp) protein (588aa)
ABC transporter, ATP-binding protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P024_AROAE
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CEJ10001.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein
13_1_40cm_scaffold_8999_14
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

13015..14775
DNA (1761bp) protein (587aa)
Xaa-Pro dipeptidyl-peptidase, peptidase family S15 (EC:3.4.14.11); K06978 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Putative uncharacterized protein id=4412368 bin=GWC2_Syntrophus__56_31 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_scaffold_8999_15
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14793..15578)
DNA (786bp) protein (262aa)
2-haloalkanoic acid dehalogenase, type II; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
2-haloalkanoic acid dehalogenase, type II n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKQ4_AZOSU
2-haloalkanoic acid dehalogenase, type II
13_1_40cm_scaffold_8999_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15790..16800
DNA (1011bp) protein (337aa)
Uncharacterized protein id=1863211 bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium vaccae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cyclase SCIF3.09c Tax=GWA2_Rokubacteria_73_35_curated
cyclase
Displaying 16 items

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