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13_1_40cm_scaffold_1420

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1420_1
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(107..829)
DNA (723bp) protein (241aa)
id=24419248 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
id=24419248 Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_1420_2
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(994..1821)
DNA (828bp) protein (276aa)
ABC transporter; K09816 zinc transport system permease protein Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter; K09816 zinc transport system permease protein id=14631711 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
ABC transporter permease
13_1_40cm_scaffold_1420_3
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1860..2693)
DNA (834bp) protein (278aa)
polyamine-transporting ATPase (EC:3.6.3.31); K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=RBG_16_Armatimonadetes_67_12_curated
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] id=14631712 bin=bin9_gal15 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
ABC transporter
13_1_40cm_scaffold_1420_4
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2659..3060)
DNA (402bp) protein (134aa)
Ferric uptake regulator, Fur family n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q314U2_DESDG
fur; ferric uptake regulator protein Fur family Tax=RBG_16_Spirochaete_67_19_curated
Fur family ferric uptake regulator
13_1_40cm_scaffold_1420_5
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3151..4047)
DNA (897bp) protein (299aa)
heavy metal ABC transporter substrate-binding protein; K09815 zinc transport system substrate-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
ABC-type metal ion transporter, periplasmic subunit id=4951364 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
heavy metal ABC transporter substrate-binding protein
13_1_40cm_scaffold_1420_6
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(4286..4708)
DNA (423bp) protein (141aa)
pilin, type IV id=24502489 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
pilin, type IV Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
13_1_40cm_scaffold_1420_trna_1
unknown

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comp(4914..4986)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_1420_7
unknown

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comp(4949..5149)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_scaffold_1420_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(5265..6242)
DNA (978bp) protein (326aa)
Mg-chelatase subunit ChlD id=24492112 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrivivax benzoatilyticus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Mg-chelatase subunit ChlD Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
von Willebrand factor A
13_1_40cm_scaffold_1420_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6286..7308)
DNA (1023bp) protein (341aa)
hypothetical protein; K07114 uncharacterized protein id=24492111 bin=RBG_19FT_COMBO_GAL15_69_19 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein; K07114 uncharacterized protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_1420_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(7287..8177)
DNA (891bp) protein (297aa)
hypothetical protein id=24492110 bin=RBG_19FT_COMBO_GAL15_69_19 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
hypothetical protein
13_1_40cm_scaffold_1420_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(8193..9218)
DNA (1026bp) protein (342aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] id=14631417 bin=bin9_gal15 species=Deinococcus apachensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
MoxR-like ATPase
13_1_40cm_scaffold_1420_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9347..10582)
DNA (1236bp) protein (412aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] id=24492106 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Displaying 13 items

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