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13_1_40cm_scaffold_812

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_812_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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1..1137
DNA (1137bp) protein (379aa)
gsiD_[H]; Dipeptide transport system permease protein DppC id=14633145 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
gsiD_[H]; Dipeptide transport system permease protein DppC Tax=CSP1_3_Armatimonadetes
gsiD_[H]; Dipeptide transport system permease protein DppC
13_1_40cm_scaffold_812_2
unknown

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comp(1377..1658)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_scaffold_812_3
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2040..3053
DNA (1014bp) protein (338aa)
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein id=14633143 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=CSP1_3_Armatimonadetes
peptide ABC transporter ATP-binding protein
13_1_40cm_scaffold_812_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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3055..3261
DNA (207bp) protein (69aa)
hypothetical protein Tax=CSP1_3_Armatimonadetes
13_1_40cm_scaffold_812_5
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

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3987..5705
DNA (1719bp) protein (573aa)
appA; ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
appA; oligopeptide-binding protein [Precursor] id=24440492 bin=RBG_19FT_COMBO_GAL15_69_19 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
dipeptide ABC transporter substrate-binding protein
13_1_40cm_scaffold_812_6
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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5772..6767
DNA (996bp) protein (332aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4U2_OCEP5
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADR37159.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Therm
13_1_40cm_scaffold_812_7
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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6760..7674
DNA (915bp) protein (305aa)
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein id=24440491 bin=RBG_19FT_COMBO_GAL15_69_19 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_812_8
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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7956..8996
DNA (1041bp) protein (347aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein id=24440493 bin=RBG_19FT_COMBO_GAL15_69_19 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
oligopeptide/dipeptide ABC transporter ATPase
13_1_40cm_scaffold_812_9
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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9034..10071
DNA (1038bp) protein (346aa)
oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein id=24440494 bin=RBG_19FT_COMBO_GAL15_69_19 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
oligopeptide ABC transporter ATP-binding protein
13_1_40cm_scaffold_812_10
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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10159..11949
DNA (1791bp) protein (597aa)
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein id=24440495 bin=RBG_19FT_COMBO_GAL15_69_19 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
dipeptide ABC transporter periplasmic protein
13_1_40cm_scaffold_812_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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12023..13048
DNA (1026bp) protein (342aa)
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein id=24440496 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermosipho melanesiensis genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
oligopeptide transporter permease AppB
13_1_40cm_scaffold_812_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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13059..14132
DNA (1074bp) protein (358aa)
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein id=24440497 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
dipeptide/oligopeptide/nickel ABC transporter permease
13_1_40cm_scaffold_812_13
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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14260..14562
DNA (303bp) protein (101aa)
gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=24440498 bin=RBG_19FT_COMBO_GAL15_69_19 species=Paenibacillus sp. JC66 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RBG_19FT_COMBO_Armatimo
glutamyl-tRNA amidotransferase
13_1_40cm_scaffold_812_14
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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14670..14972
DNA (303bp) protein (101aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RBG_16_Armatimonadetes_67_12_curated
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=24440499 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Displaying 14 items

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