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13_1_40cm_scaffold_1598

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1598_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2..2971
DNA (2970bp) protein (990aa)
Putative Cna B-type protein n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NMD3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_40cm_scaffold_1598_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3097..4554
DNA (1458bp) protein (486aa)
Amidase (EC:3.5.1.4)
amidase n=1 Tax=Spirosoma spitsbergense RepID=UPI00037A180D
Amidase {ECO:0000313|EMBL:CCH53737.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
13_1_40cm_scaffold_1598_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4691..6220
DNA (1530bp) protein (510aa)
pyruvate carboxylase subunit A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetyl-CoA carboxylase, biotin carboxylase id=12555778 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyruvate carboxylase subunit A
13_1_40cm_scaffold_1598_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6267..6776
DNA (510bp) protein (170aa)
Biotin carboxyl carrier protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMJ9_ANADE
biotin/lipoyl attachment Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
biotin/lipoyl attachment protein
13_1_40cm_scaffold_1598_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6773..10912
DNA (4140bp) protein (1380aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K09800 hypothetical protein id=12555780 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1598_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10994..13816
DNA (2823bp) protein (941aa)
surface antigen Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
surface antigen id=12555781 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane protein/protective antigen OMA87
13_1_40cm_scaffold_1598_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

13819..14364
DNA (546bp) protein (182aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
13_1_40cm_scaffold_1598_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14373..15140)
DNA (768bp) protein (256aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12555789 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
caax amino terminal protease family protein
13_1_40cm_scaffold_1598_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15186..15905)
DNA (720bp) protein (240aa)
transport-associated protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein id=12554401 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_scaffold_1598_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16063..17484
DNA (1422bp) protein (474aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
response regulator in two-component regulatory system, sigma 54-dependent id=12556020 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
13_1_40cm_scaffold_1598_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17602..19512
DNA (1911bp) protein (637aa)
Multi-sensor signal transduction histidine kinase (EC:2.7.3.-) id=12556021 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
histidine kinase
13_1_40cm_scaffold_1598_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

19519..20115
DNA (597bp) protein (199aa)
Protein TolA n=1 Tax=Thauera sp. 28 RepID=N6YHM7_9RHOO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
tonB; protein TonB
13_1_40cm_scaffold_1598_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21124..23421
DNA (2298bp) protein (766aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=12555790 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonucleoside-diphosphate reductase class II (EC:1.17.4.1)
13_1_40cm_scaffold_1598_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

23597..24127
DNA (531bp) protein (177aa)
DinB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WE7_SOLUE
DinB family protein
DinB family protein {ECO:0000313|EMBL:ABJ86018.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (s
13_1_40cm_scaffold_1598_15
unknown

Not on your lists

24214..24687
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_scaffold_1598_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24889..25305
DNA (417bp) protein (139aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BH26_9BACT
Putative integron gene cassette protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_40cm_scaffold_1598_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(25312..26010)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZQ4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84861.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_scaffold_1598_18
unknown

Not on your lists

comp(26007..26459)
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_scaffold_1598_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26513..26728)
DNA (216bp) protein (72aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=2811811 bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
13_1_40cm_scaffold_1598_20
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26801..27082)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM89_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:KJC58852.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
13_1_40cm_scaffold_1598_21
unknown

Not on your lists

comp(27092..27220)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 21 items

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