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13_1_40cm_scaffold_1960

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1960_1
unknown

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comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_scaffold_1960_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(132..1175)
DNA (1044bp) protein (348aa)
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein id=12556223 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chaperone DnaJ domain-containing protein
13_1_40cm_scaffold_1960_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(1301..1648)
DNA (348bp) protein (116aa)
HspR; K13640 MerR family transcriptional regulator, heat shock protein HspR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
transcriptional regulator, MerR family; K13640 MerR family transcriptional regulator, heat shock protein HspR id=12556222 bin=CNBR_ACIDO species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HspR
13_1_40cm_scaffold_1960_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1767..2522
DNA (756bp) protein (252aa)
YkoY family integral membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative stress adaptation transporter id=12556221 bin=CNBR_ACIDO species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
YkoY family integral membrane protein
13_1_40cm_scaffold_1960_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2666..4534
DNA (1869bp) protein (623aa)
1A family penicillin-binding protein (EC:2.4.1.129) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-)
Multimodular transpeptidase-transglycosylase id=4841960 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_1960_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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4561..6522
DNA (1962bp) protein (654aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000310D1D4
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PAS sensor protein
13_1_40cm_scaffold_1960_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6656..8497
DNA (1842bp) protein (614aa)
malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucan
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CI5_SOLUE
13_1_40cm_scaffold_1960_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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8504..11278
DNA (2775bp) protein (925aa)
malQ4; 4-alpha-glucanotransferase (EC:2.4.1.25) Tax=GWC2_Nitrospirae_57_9_curated
Glycogen debranching protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCF2_SORCE
glycogen debranching protein
13_1_40cm_scaffold_1960_9
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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11615..11905
DNA (291bp) protein (97aa)
YVTN beta-propeller repeat-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXW1_9GAMM
YVTN beta-propeller repeat-containing protein
YVTN beta-propeller repeat-containing protein {ECO:0000313|EMBL:AIE86226.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" sourc
Displaying 9 items

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