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13_1_40cm_scaffold_5238

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_5238_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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3..1505
DNA (1503bp) protein (501aa)
Putative PQQ enzyme repeat protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1E8_9ZZZZ
pyrrolo-quinoline quinone Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
pyrrolo-quinoline quinone
13_1_40cm_scaffold_5238_2
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

1520..2059
DNA (540bp) protein (180aa)
Tax=CG_Elusi_01
13_1_40cm_scaffold_5238_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2189..2644)
DNA (456bp) protein (152aa)
response regulator receiver sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_5238_4
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2681..3856)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HRK6_9SPHN
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAN54391.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticha
FAD dependent oxidoreductase
13_1_40cm_scaffold_5238_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3905..4984)
DNA (1080bp) protein (360aa)
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG92466.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
neuraminidase id=12556736 bin=CNBR_ACIDO species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_scaffold_5238_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5091..5327
DNA (237bp) protein (79aa)
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain id=14624117 bin=bin5_DeltaP species=Thiothrix disciformis genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
13_1_40cm_scaffold_5238_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5321..5665
DNA (345bp) protein (115aa)
PemK-like protein; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034B56DA
growth inhibitor
13_1_40cm_scaffold_5238_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5565..6272)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035EF962
YceI family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
YceI family protein
13_1_40cm_scaffold_5238_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6364..9321)
DNA (2958bp) protein (986aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
TonB-dependent receptor id=12556886 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
13_1_40cm_scaffold_5238_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9521..10810
DNA (1290bp) protein (430aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TF6_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
Displaying 10 items

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