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13_1_40cm_scaffold_623

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_623_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

198..1379
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002DD8B16
MFS transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
permease (major facilitator superfamily)
13_1_40cm_scaffold_623_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1362..1790)
DNA (429bp) protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=1778237 bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative protein of unknown function DUF55
13_1_40cm_scaffold_623_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1825..2310
DNA (486bp) protein (162aa)
mug; G:T/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:CBK40096.1}; EC=3.2.2.- {ECO:0000313|EMBL:CBK40096.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira
G:T/U mismatch-specific DNA glycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA37_9BACT
13_1_40cm_scaffold_623_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2470..5403
DNA (2934bp) protein (978aa)
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
TonB-dependent receptor id=12556886 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
13_1_40cm_scaffold_623_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5407..6474
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0770_11C06 RepID=E7C6X9_9BACT
cyclase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
cyclase
13_1_40cm_scaffold_623_6
RLO_PLX_64_10, Bacteria

Not on your lists

comp(6526..6966)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037D6A5F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_scaffold_623_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7090..8982)
DNA (1893bp) protein (631aa)
TPR repeat-containing protein n=1 Tax=Rhodopirellula baltica WH47 RepID=F2ANY5_RHOBT
signal peptide Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
c-type cytochrome precursor
13_1_40cm_scaffold_623_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9053..10396
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020C4_SOLUE
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiol-disulfide isomerase or thioredoxin
13_1_40cm_scaffold_623_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10407..11354
DNA (948bp) protein (316aa)
PKD n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FS58_METHJ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_scaffold_623_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11391..13190)
DNA (1800bp) protein (600aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Type II secretion system protein E (GspE) id=3960247 bin=GWA2_Methylomirabilis_73_35 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type II secretion system protein E (GspE)
13_1_40cm_scaffold_623_11
unknown

Not on your lists

comp(13505..13990)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_40cm_scaffold_623_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14024..14281
DNA (258bp) protein (86aa)
ThiJ/PfpI domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFM3_ANADF
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain protein {ECO:0000313|EMBL:ABS27519.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_scaffold_623_13
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14323..15267
DNA (945bp) protein (315aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ABU59851.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ABU59851.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae;
Ribose-phosphate pyrophosphokinase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQK5_ROSCS
13_1_40cm_scaffold_623_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15428..16963)
DNA (1536bp) protein (512aa)
Cytochrome c assembly protein id=4238829 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
cytochrome c assembly protein Tax=GWA2_Elusimicrobia_69_24_curated
putative cytochrome c biogenesis protein
13_1_40cm_scaffold_623_15
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(17240..18277)
DNA (1038bp) protein (346aa)
UPI0003CE06A3 related cluster n=1 Tax=unknown RepID=UPI0003CE06A3
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
hypothetical protein
13_1_40cm_scaffold_623_16
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18274..18627)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM35596.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
TIGR04076 family protein
13_1_40cm_scaffold_623_17
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18686..19576
DNA (891bp) protein (297aa)
Conserved hypothetical integral membrane protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TL29_ALKMQ
hypothetical protein
Conserved hypothetical integral membrane protein {ECO:0000313|EMBL:ABR46897.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphi
13_1_40cm_scaffold_623_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19586..21082
DNA (1497bp) protein (499aa)
Putative amino acid transporter n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPS5_9GAMM
amino acid permease Tax=RBG_16_Gemmatimonadetes_66_8_curated
amino acid permease
13_1_40cm_scaffold_623_19
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21079..21492
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000374AF37
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADI14444.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DS
Displaying 19 items

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