ggKbase home page

13_1_40cm_scaffold_948

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_948_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1..1176
DNA (1176bp) protein (392aa)
id=14631018 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
id=14631018 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
13_1_40cm_scaffold_948_2
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1243..4044)
DNA (2802bp) protein (934aa)
TonB-dependent receptor n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8T0_TERSS
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADV84117.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
13_1_40cm_scaffold_948_3
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4640..5185)
DNA (546bp) protein (182aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
RNA methyltransferase, TrmH family, group 1 n=2 Tax=Sphingobium RepID=J2LA69_9SPHN
GIY-YIG domain-containing protein
13_1_40cm_scaffold_948_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5546..5764
DNA (219bp) protein (73aa)
Plasmid maintenance system killer n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJE2_RHOPT
plasmid maintenance system killer protein; K07334 proteic killer suppression protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
plasmid maintenance system killer protein
13_1_40cm_scaffold_948_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5778..6065
DNA (288bp) protein (96aa)
XRE family transcriptional regulator n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6B007
XRE family plasmid maintenance system antidote protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
XRE family plasmid maintenance system antidote protein
13_1_40cm_scaffold_948_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6065..6415
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
13_1_40cm_scaffold_948_7
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6912..9950
DNA (3039bp) protein (1013aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AS00_MARSH
Uncharacterized protein {ECO:0000313|EMBL:EAR01373.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain
hypothetical protein
13_1_40cm_scaffold_948_8
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10042..10314
DNA (273bp) protein (91aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HND6_9GAMM
3-demethylubiquinone-9 3-methyltransferase
3-demethylubiquinone-9 3-methyltransferase domain protein, putative {ECO:0000313|EMBL:AFT68703.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracac
13_1_40cm_scaffold_948_9
unknown

Not on your lists

10624..11328
DNA (705bp) protein (235aa)

This feature has no annotations

13_1_40cm_scaffold_948_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11334..11651
DNA (318bp) protein (106aa)
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=3 Tax=mine drainage metagenome RepID=T1B596_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_scaffold_948_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11701..12315)
DNA (615bp) protein (205aa)
endoglucanase-like protein (EC:3.2.1.-)
APHP domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF53_9BACT
APHP domain protein {ECO:0000313|EMBL:EEF61551.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.
Displaying 11 items

View Taxonomy