ggKbase home page

15con1.8.AGTCAA_scaffold_396

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
15con1.8.AGTCAA_scaffold_396_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

3..464
DNA (462bp) protein (154aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0X9_DESTA
theronine dehydrogenase-like Zn-dependent dehydrogenase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_2

Not on your lists

587..1300
DNA (714bp) protein (238aa)
Predicted oxidoreductase FAD/NAD(P)-binding component n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W8X3_UNCMA
Xylene monooxygenase electron transfer component {ECO:0000313|EMBL:KHO49371.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
oxidoreductase FAD/NAD(P)-binding component
15con1.8.AGTCAA_scaffold_396_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

1420..3381
DNA (1962bp) protein (654aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=14630858 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Tax=RBG_16_Euryarchaeota_68_12_curated
15con1.8.AGTCAA_scaffold_396_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3415..4761)
DNA (1347bp) protein (449aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
15con1.8.AGTCAA_scaffold_396_5
unknown

Not on your lists

4990..5871
DNA (882bp) protein (294aa)

This feature has no annotations

15con1.8.AGTCAA_scaffold_396_6
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(5929..6648)
DNA (720bp) protein (240aa)
ABC efflux transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFB3_NITGG
ABC efflux transporter permease
Tax=RBG_16_Euryarchaeota_68_13_curated
15con1.8.AGTCAA_scaffold_396_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6653..7537)
DNA (885bp) protein (295aa)
ABC transporter, ATP binding protein n=1 Tax=mine drainage metagenome RepID=T1CZ18_9ZZZZ
ABC efflux transporter, ATP-binding protein
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_396_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7703..9415
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-F05 RepID=UPI000379BBEA
frdA; fumarate reductase flavoprotein subunit frdA
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_9
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9417..10163
DNA (747bp) protein (249aa)
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1) id=14631498 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
frdB; Fumarate reductase (anaerobic), Fe-S subunit (EC:1.3.99.1)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

10240..10557
DNA (318bp) protein (106aa)
Fumarate reductase subunit C n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW28_9BURK
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_396_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10595..11011
DNA (417bp) protein (139aa)
frdD; fumarate reductase subunit D FrdD; K00247 fumarate reductase subunit D id=14424440 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
frdD; Fumarate reductase subunit D
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10938..11369)
DNA (432bp) protein (144aa)
Peptidase U32 n=1 Tax=uncultured organism RepID=M1PQS3_9ZZZZ
Translation elongation factor-like protein
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_396_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11507..11722
DNA (216bp) protein (72aa)
Small nuclear ribonucleoprotein n=2 Tax=Methanomassiliicoccus RepID=U5Q212_9EURY
small nuclear ribonucleoprotein (snRNP)-like protein
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_396_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

11772..12782
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036033DF
nucleotidyltransferase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

12779..14137
DNA (1359bp) protein (453aa)
phosphoglucosamine mutase (EC:5.4.2.10)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360BBF5
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_396_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14126..14911)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003766F4D
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
15con1.8.AGTCAA_scaffold_396_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(14968..15984)
DNA (1017bp) protein (339aa)
Flap endonuclease 1 n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HMZ0_ACIS0
flap structure-specific endonuclease
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(16074..23231)
DNA (7158bp) protein (2386aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EC543
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

23480..23848
DNA (369bp) protein (123aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
15con1.8.AGTCAA_scaffold_396_20
unknown

Not on your lists

comp(23845..24003)
DNA (159bp) protein (53aa)

This feature has no annotations

15con1.8.AGTCAA_scaffold_396_21
unknown

Not on your lists

24195..25154
DNA (960bp) protein (320aa)

This feature has no annotations

15con1.8.AGTCAA_scaffold_396_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

25239..25907
DNA (669bp) protein (223aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IA71_ACIB4
Tax=RBG_16_Euryarchaeota_68_12_curated
15con1.8.AGTCAA_scaffold_396_23
unknown

Not on your lists

25973..26239
DNA (267bp) protein (89aa)

This feature has no annotations

15con1.8.AGTCAA_scaffold_396_24
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

26252..26878
DNA (627bp) protein (209aa)
Transketolase, N-terminal subunit n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYI8_PELTS
transketolase, N-terminal subunit
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 24 items

View Taxonomy