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14_1009_05_40cm_scaffold_1223

Search features with annotation key words

Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_05_40cm_scaffold_1223_1
unknown

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

14_1009_05_40cm_scaffold_1223_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

391..711
DNA (321bp) protein (107aa)
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_05_40cm_scaffold_1223_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

947..1159
DNA (213bp) protein (71aa)
2-oxoisovalerate dehydrogenase, E1 component beta subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CNE3_DESK7
2-oxoisovalerate dehydrogenase E1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_1009_05_40cm_scaffold_1223_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

1168..1413
DNA (246bp) protein (82aa)
YcfA family protein; K07339 hypothetical protein id=1242699 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
14_1009_05_40cm_scaffold_1223_5
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1459..2787)
DNA (1329bp) protein (443aa)
Oxidoreductase domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R589_ISOPI rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ADV63842.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
14_1009_05_40cm_scaffold_1223_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3018..4013)
DNA (996bp) protein (332aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family id=12555365 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphate transporter
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_40cm_scaffold_1223_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4017..4643)
DNA (627bp) protein (209aa)
Putative uncharacterized protein id=3122078 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_40cm_scaffold_1223_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4815..6449)
DNA (1635bp) protein (545aa)
60 kDa chaperonin n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CH60_KORVE
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
14_1009_05_40cm_scaffold_1223_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6611..6931)
DNA (321bp) protein (107aa)
10 kDa chaperonin n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG61_CHLTF
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Co-chaperonin GroES (HSP10)
14_1009_05_40cm_scaffold_1223_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

7199..9196
DNA (1998bp) protein (666aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7L2_ANAD2
signal transduction histidine kinase, nitrogen specific, NtrB
14_1009_05_40cm_scaffold_1223_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9209..10609
DNA (1401bp) protein (467aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A837_THEID
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM64893.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Fis family two component sigma-54 specific transcriptional regulator
14_1009_05_40cm_scaffold_1223_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10646..11293
DNA (648bp) protein (216aa)
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IML2_KORVE
molybdenum cofactor guanylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_05_40cm_scaffold_1223_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

11290..12066
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0B4_TERSS
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_1009_05_40cm_scaffold_1223_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12063..13511
DNA (1449bp) protein (483aa)
Amino acid permease-associated region n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01N99_SOLUE rbh
Amino acid permease {ECO:0000313|EMBL:GAO56766.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amino acid permease rbh
14_1009_05_40cm_scaffold_1223_15
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13508..14170)
DNA (663bp) protein (221aa)
ial:IALB_2405 ribE; Riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] id=719659 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
ribE; riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AFH50108.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
14_1009_05_40cm_scaffold_1223_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14279..15280
DNA (1002bp) protein (334aa)
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:CDM64523.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CDM64523.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
zinc-binding alcohol dehydrogenase family protein (EC:1.1.1.1)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379060A
14_1009_05_40cm_scaffold_1223_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15286..16392)
DNA (1107bp) protein (369aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F6U5_ACIC5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_05_40cm_scaffold_1223_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16752..17723)
DNA (972bp) protein (324aa)
cell division protein FtsY n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371D203
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_05_40cm_scaffold_1223_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17822..18040)
DNA (219bp) protein (73aa)
Outer membrane transport energization protein ExbD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE5_KORVE
biopolymer transport protein ExbD/TolR
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:ABF39155.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_1009_05_40cm_scaffold_1223_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(18297..20093)
DNA (1797bp) protein (599aa)
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB4_KORVE
metal dependent phosphohydrolase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_40cm_scaffold_1223_21
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(20229..21233)
DNA (1005bp) protein (335aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GPDA_KORVE
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
14_1009_05_40cm_scaffold_1223_22
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21230..21868)
DNA (639bp) protein (213aa)
Glycerol-3-phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000255|HAMAP-Rule:MF_01043}; Short=GPAT {ECO:0000255|HAMAP-Rule:MF_01043};; EC=2.3.1.n3 {ECO:0000255|HAMAP-Rule:MF_01043};; Lysophosphatidic acid synthase {ECO:0000255|HAMAP-Rule:MF_01043}; Short=LPA synthase {ECO:0000255|HAMAP-Rule:MF_01043};; TaxID=338963 spec
Glycerol-3-phosphate acyltransferase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=PLSY_PELCD
plsY; hypothetical protein
14_1009_05_40cm_scaffold_1223_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(21875..22438)
DNA (564bp) protein (188aa)
2'-5' RNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C89_SOLUE
2'-5' RNA ligase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_40cm_scaffold_1223_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22445..23689)
DNA (1245bp) protein (415aa)
CinA-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CINAL_KORVE
competence/damage-inducible protein cinA
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_1009_05_40cm_scaffold_1223_25
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23691..24122)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y330_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFB66630.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
14_1009_05_40cm_scaffold_1223_26
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(24126..25193)
DNA (1068bp) protein (356aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPQ8_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_05_40cm_scaffold_1223_27
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(25190..25906)
DNA (717bp) protein (239aa)
Phosphatidylglycerophosphatase A n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAT2_9PLAN
Phosphatidylglycerophosphatase A {ECO:0000313|EMBL:EDL58198.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
phosphatidylglycerophosphatase A
14_1009_05_40cm_scaffold_1223_28
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(25890..26120)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028J1_SOLUE
hypothetical protein
DNA gyrase inhibitor YacG {ECO:0000256|SAAS:SAAS00085446}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_1009_05_40cm_scaffold_1223_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(26225..27739)
DNA (1515bp) protein (505aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000255|HAMAP-Rule:MF_01865}; Short=S12 MTTase {ECO:0000255|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000255|HAMAP-Rule:MF_01865};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000255|HAMAP-Rule:MF_01865}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Can
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RIMO_SOLUE
MiaB-like tRNA modifying protein YliG
14_1009_05_40cm_scaffold_1223_30
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(27852..30098)
DNA (2247bp) protein (749aa)
Transglutaminase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPQ3_KORVE rbh
transglutaminase rbh
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying items 1-30 of 49 in total

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