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QC4_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_398_1
unknown

Not on your lists

comp(352..1419)
DNA (1068bp) protein (356aa)

This feature has no annotations

QC4_scaffold_398_2
unknown

Not on your lists

comp(1416..2024)
DNA (609bp) protein (203aa)

This feature has no annotations

QC4_scaffold_398_3
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(2148..3728)
DNA (1581bp) protein (527aa)
Putative TPR domain-containing protein Tax=Brachyspira intermedia (strain ATCC 51140 / PWS/A) RepID=G0EKS4_BRAIP
TPR domain-containing protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
QC4_scaffold_398_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3697..4284)
DNA (588bp) protein (196aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC24_9CLOT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EOC99854.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
RNA polymerase sigma-E factor
QC4_scaffold_398_5
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4677..5717)
DNA (1041bp) protein (347aa)
ISPg1, transposase Tax=uncultured bacterium RepID=K2C4A4_9BACT
transposase IS4 family
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_398_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

7129..8187
DNA (1059bp) protein (353aa)
Anthranilate phosphoribosyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=TRPD_GEOUR
trpD; anthranilate phosphoribosyltransferase
Tax=CG_Elusi_05
QC4_scaffold_398_7
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

8180..8971
DNA (792bp) protein (264aa)
hypothetical protein Tax=Orenia marismortui RepID=UPI0003754C4A
Indole-3-glycerol phosphate synthase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
QC4_scaffold_398_8
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

8976..9668
DNA (693bp) protein (231aa)
trpF; N-(5'phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase Tax=Nitrospina gracilis 3/211 RepID=M1ZDY0_9BACT
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_398_9
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

9714..9947
DNA (234bp) protein (78aa)
nitrogen-fixing protein NifU Tax=Orenia marismortui RepID=UPI00037D76FC
nitrogen-fixing NifU domain-containing protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_398_10
unknown

Not on your lists

9940..10680
DNA (741bp) protein (247aa)

This feature has no annotations

QC4_scaffold_398_11
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10671..12767
DNA (2097bp) protein (699aa)
Uncharacterized protein Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MEU1_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18420.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
QC4_scaffold_398_12
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

12775..13515
DNA (741bp) protein (247aa)
Cobyrinic acid ac-diamide synthase Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM94_9DELT
cooC1; CO dehydrogenase nickel-insertion accessory protein CooC
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_398_13
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13725..14156
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIP0_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI20242.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
QC4_scaffold_398_14
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14995..15729)
DNA (735bp) protein (245aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Acetonema longum DSM 6540 RepID=F7NKV5_9FIRM
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EGO63298.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
conserved protein of unknown function
QC4_scaffold_398_trna_2
unknown

Not on your lists

comp(15767..15841)
DNA (75bp)
transferRNA Glu
QC4_scaffold_398_15
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15905..16615)
DNA (711bp) protein (237aa)
ribonuclease III (EC:3.1.26.3)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037174DD
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_398_16
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(16621..17865)
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0Q1_UNCTG
3-oxoacyl-[acyl-carrier-protein] synthase II
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_398_17
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(17896..18144)
DNA (249bp) protein (83aa)
acyl carrier protein Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B39E9D
acyl carrier protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
QC4_scaffold_398_18
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18341..19033)
DNA (693bp) protein (231aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Firmicutes bacterium CAG:41 RepID=R6MKU2_9FIRM
3-oxoacyl-[acyl-carrier-protein] reductase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_398_19
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19045..20001)
DNA (957bp) protein (319aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI0003705033
malonyl CoA-acyl carrier protein transacylase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_398_20
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20012..21004)
DNA (993bp) protein (331aa)
FabH3; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Caldanaerobacter subterraneus RepID=FABH_THETN
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_398_21
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(21001..22017)
DNA (1017bp) protein (339aa)
Phosphate acyltransferase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=PLSX_UNCTG
fatty acid/phospholipid synthesis protein PlsX
Tax=CG_Elusi_05
QC4_scaffold_398_22
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists


comp(22027..22230)
DNA (204bp) protein (68aa)
50S ribosomal protein L32 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S335_THEOJ
50S ribosomal protein L32
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_398_23
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22256..22693)
DNA (438bp) protein (146aa)
COG1399 protein clustered with ribosomal protein L32p Tax=Acidiphilium sp. CAG:727 RepID=R7G5N4_9PROT
COG1399 protein clustered with ribosomal protein L32p {ECO:0000313|EMBL:CDE21332.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
QC4_scaffold_398_24
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22714..23898)
DNA (1185bp) protein (395aa)
Acetate kinase Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=ACKA_CALS8
acetate kinase A/propionate kinase 2
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_398_25
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23904..24965)
DNA (1062bp) protein (354aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000365B819
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QC4_scaffold_398_26
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

25122..26141
DNA (1020bp) protein (340aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Tax=CG_Elusi_05
QC4_scaffold_398_27
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

26151..27473
DNA (1323bp) protein (441aa)
Amine oxidase Tax=planctomycete KSU-1 RepID=I3IIR0_9PLAN
amine oxidase family protein
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_398_28
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

27470..27898
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C5W5_THEGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH23106.1}; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
QC4_scaffold_398_29
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

27895..29106
DNA (1212bp) protein (404aa)
Glycosyltransferase bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
glycosyltransferase
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
Displaying items 1-30 of 51 in total

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