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QC4_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_475_1
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

2..1333
DNA (1332bp) protein (444aa)
Cell wall surface anchor family protein bin=GWF2_Lentisphaerae_52_8 species=Streptococcus sanguinis genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_52_8_curated
QC4_scaffold_475_2
BJP_IG2157_CP_49_12, Bacteria

Not on your lists

1333..2700
DNA (1368bp) protein (456aa)
Adenylate/guanylate cyclase with integral membrane sensor bin=GWB2_Elusimicrobium_63_22 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
adenylate/guanylate cyclase with integral membrane sensor
Tax=BJP_IG2157_CP_49_12
QC4_scaffold_475_3
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

3105..3890
DNA (786bp) protein (262aa)
Putative ribose 1,5-bisphosphate isomerase Tax=Pyrococcus sp. (strain NA2) RepID=F4HJT0_PYRSN
ribulose-1,5-biphosphate synthetase
Tax=CG_Elusi_05
QC4_scaffold_475_4

Not on your lists

3910..4722
DNA (813bp) protein (271aa)
Marine sediment metagenome DNA, contig: S06H3_L00565 {ECO:0000313|EMBL:GAI10986.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
QC4_scaffold_475_5
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

5116..5658
DNA (543bp) protein (181aa)
Nitrogen-fixing NifU domain protein bin=CD_OP8_4m species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
putative Fe-S cluster assembly protein (NifU-like)
Tax=RBG_13_Aminicenantes_63_10_curated
QC4_scaffold_475_6
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5665..6870
DNA (1206bp) protein (402aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QVL0_ACEAZ
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
QC4_scaffold_475_7

Not on your lists

6988..7353
DNA (366bp) protein (122aa)
hypothetical protein; K07090 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Uncharacterized protein {ECO:0000313|EMBL:KKS95659.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_43_14.;"
sulfite exporter TauE/SafE
QC4_scaffold_475_8
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7350..8795
DNA (1446bp) protein (482aa)
Protease Do-like 10, mitochondrial Tax=uncultured Desulfobacterium sp. RepID=E1Y957_9DELT
Protease Do-like 10, mitochondrial {ECO:0000313|EMBL:CBX27101.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
serine protease, related to trypsin
QC4_scaffold_475_9
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

8812..10080
DNA (1269bp) protein (423aa)
DNA and RNA helicase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LIA0_9BACT
DNA and RNA helicase
Tax=CG_Elusi_05
QC4_scaffold_475_10
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

10536..11429
DNA (894bp) protein (298aa)
hypothetical protein Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B39EC4
permease
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_475_trna_1
unknown

Not on your lists

11597..11672
DNA (76bp)
transferRNA Asp
QC4_scaffold_475_11
unknown

Not on your lists

12241..12456
DNA (216bp) protein (72aa)

This feature has no annotations

QC4_scaffold_475_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12692..12967
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Clostridium sp. CAG:413 RepID=R6NXQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13219.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
QC4_scaffold_475_13
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

13108..13614
DNA (507bp) protein (169aa)
Phosphopantetheine adenylyltransferase Tax=delta proteobacterium NaphS2 RepID=D8F109_9DELT
pantetheine-phosphate adenylyltransferase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
QC4_scaffold_475_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

13618..15354
DNA (1737bp) protein (579aa)
Type IV pilus assembly protein PilB bin=GWA2_Elusimicrobia_66_18 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
GspE; pili biogenesis protein PilB-like ATPase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_475_15
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

15365..17089
DNA (1725bp) protein (575aa)
type IV pilus assembly protein PilB
Type IV pilus assembly protein PilB bin=GWA2_Elusimicrobia_51_34 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_475_16
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

17117..18193
DNA (1077bp) protein (359aa)
Twitching motility protein PilT bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
twitching motility protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_475_17

Not on your lists

comp(18208..18738)
DNA (531bp) protein (177aa)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:CBH36845.1}; EC=2.7.4.6 {ECO:0000313|EMBL:CBH36845.1};; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Nucleoside diphosphate kinase Tax=uncultured archaeon RepID=D1JE87_9ARCH
nucleoside diphosphate kinase
QC4_scaffold_475_18
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

18925..20082
DNA (1158bp) protein (386aa)
Major facilitator superfamily MFS_1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7APG9_THEM3
major facilitator superfamily protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QC4_scaffold_475_19
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

20523..21032
DNA (510bp) protein (170aa)
nitroreductase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B54744
nitroreductase
Tax=CG_Elusi_05
QC4_scaffold_475_20
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

21048..21491
DNA (444bp) protein (148aa)
NUDIX hydrolase Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B436B8
ADP-ribose pyrophosphatase
Tax=CG_Elusi_05
QC4_scaffold_475_21
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

21508..22692
DNA (1185bp) protein (395aa)
Tyrosine--tRNA ligase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZW0_UNCTG
tyrosyl-tRNA synthetase
Tax=CG_Elusi_05
QC4_scaffold_475_22
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

22733..22972
DNA (240bp) protein (80aa)
hypothetical protein bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=CG_Elusi_05
QC4_scaffold_475_23
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

22962..23945
DNA (984bp) protein (328aa)
arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose-5-phosphate isomerase Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KC19_ELUMP
Tax=CG_Elusi_05
QC4_scaffold_475_24
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

23951..24490
DNA (540bp) protein (180aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H079_UNCTG
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_475_25
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

24480..25373
DNA (894bp) protein (298aa)
lipid A biosynthesis lauroyl acyltransferase (EC:2.3.1.-)
Lipid A biosynthesis lauroyl acyltransferase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_475_26
uncultured Termite group 1 bacterium, Elusimicrobia, Bacteria

Not on your lists

25400..25936
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H080_UNCTG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG13912.1}; species="Bacteria; Elusimicrobia; environmental samples.;" source="Uncultured termite group 1 bacterium phylotype Rs-D17.;"
QC4_scaffold_475_27
unknown

Not on your lists

25941..26639
DNA (699bp) protein (233aa)

This feature has no annotations

QC4_scaffold_475_28
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

26684..27403
DNA (720bp) protein (240aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES0_9BACT
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_475_29
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

27425..27949
DNA (525bp) protein (175aa)
Sigma 54 modulation protein/ribosomal protein S30EA Tax=Chthoniobacter flavus Ellin428 RepID=B4D5R5_9BACT
RNA-binding protein
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
Displaying items 1-30 of 46 in total

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