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QC4_scaffold_1331

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_1331_1
CG_Omnitr_07, Omnitrophica, Bacteria

Not on your lists

comp(109..828)
DNA (720bp) protein (240aa)
Putative PAPS reductase Tax=uncultured crenarchaeote RepID=Q702F7_9CREN
putative PAPS reductase
Tax=CG_Omnitr_07
QC4_scaffold_1331_2

Not on your lists

comp(910..1356)
DNA (447bp) protein (149aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XLP8_CALS8
Marine sediment metagenome DNA, contig: S01H1_L05265 {ECO:0000313|EMBL:GAF78110.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BadM/Rrf2 family transcriptional regulator
QC4_scaffold_1331_3
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1732..4539)
DNA (2808bp) protein (936aa)
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_1331_4
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4536..6062)
DNA (1527bp) protein (509aa)
Competence ATPase ComM bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Mg chelatase-related protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1331_5
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6069..6935)
DNA (867bp) protein (289aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QC4_scaffold_1331_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists


comp(6952..8631)
DNA (1680bp) protein (560aa)
30S ribosomal protein S1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8Y3_THEID
30S ribosomal protein S1
Tax=CG_Elusi_05
QC4_scaffold_1331_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8631..9521)
DNA (891bp) protein (297aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z6G7_9FIRM
QC4_scaffold_1331_8
unknown

Not on your lists

comp(9518..9700)
DNA (183bp) protein (61aa)

This feature has no annotations

QC4_scaffold_1331_9
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(9678..10355)
DNA (678bp) protein (226aa)
Cytidylate kinase Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QK81_9FIRM
cytidylate kinase
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_1331_10
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10361..11644)
DNA (1284bp) protein (428aa)
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
3-phosphoshikimate 1-carboxyvinyltransferase
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_1331_11
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11641..12495)
DNA (855bp) protein (285aa)
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase bin=GWA2_OP3_52_12 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_1331_12
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(12513..13526)
DNA (1014bp) protein (338aa)
3-deoxy-7-phosphoheptulonate synthase Tax=uncultured Termite group 1 bacterium RepID=B1GYQ4_UNCTG
3-deoxy-7-phosphoheptulonate synthase
Tax=CG_Elusi_05
QC4_scaffold_1331_13
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14063..14380)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Chamaesiphon minutus PCC 6605 RepID=K9UEK9_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY93557.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
QC4_scaffold_1331_14
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(14377..14601)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BLZ5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK61591.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
QC4_scaffold_1331_15
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(15167..16210)
DNA (1044bp) protein (348aa)
beta-lactamase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B46AE8
come-like protein, Metallo beta-lactamase superfamily hydrolase, secreted
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_1331_16
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(16221..18104)
DNA (1884bp) protein (628aa)
Conserved uncharacterized protein bin=GWC2_ACD39_50_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
QC4_scaffold_1331_17
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(18118..21504)
DNA (3387bp) protein (1129aa)
DNA internalization-related competence protein ComEC bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
DNA internalization-related competence protein ComEC/Rec2
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_1331_18
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(21508..21702)
DNA (195bp) protein (65aa)
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_1331_19
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21708..22568)
DNA (861bp) protein (287aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QC4_scaffold_1331_20
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22565..23044)
DNA (480bp) protein (160aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1331_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23123..23896)
DNA (774bp) protein (258aa)
Lipopolysaccharide biosynthesis protein Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCQ2_DICT6
lipopolysaccharide biosynthesis protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Displaying 21 items

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