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QC4_scaffold_1564

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_1564_1
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

159..1388
DNA (1230bp) protein (410aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003605422
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1564_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

1378..1986
DNA (609bp) protein (203aa)
NADPH-dependent FMN reductase bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1564_3
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

2011..2358
DNA (348bp) protein (116aa)
hypothetical protein bin=GWB2_Elusimicrobia_63_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_1564_trna_1
unknown

Not on your lists

2377..2450
DNA (74bp)
transferRNA Gly
QC4_scaffold_1564_4
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

2684..2941
DNA (258bp) protein (86aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037BDF05
hypothetical protein
Tax=Caldatribacterium californiense
QC4_scaffold_1564_5
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

3069..4352
DNA (1284bp) protein (428aa)
SycA bin=GWF2_Planctomycete_41_51 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
SycA
Tax=GWA2_Nitrospirae_42_11_curated
QC4_scaffold_1564_6

Not on your lists

4642..5088
DNA (447bp) protein (149aa)
Iron dependent repressor Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4Y3_DESAP
Marine sediment metagenome DNA, contig: S06H3_S11940 {ECO:0000313|EMBL:GAI41235.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
iron dependent repressor
QC4_scaffold_1564_7
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

5085..5324
DNA (240bp) protein (80aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI00036A8CD0
FeoA family protein
Tax=CG_Elusi_02
QC4_scaffold_1564_8
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

5321..7015
DNA (1695bp) protein (565aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI00035CE388
small GTP-binding protein
Tax=CG_Elusi_05
QC4_scaffold_1564_9
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

7034..7945
DNA (912bp) protein (304aa)
Uncharacterized protein Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0T9_DESTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY72743.1}; species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
QC4_scaffold_1564_10
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

7942..9273
DNA (1332bp) protein (444aa)
Ribosomal protein S12 methylthiotransferase RimO Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R8S5_9THEO
MiaB-like tRNA modifying protein YliG
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QC4_scaffold_1564_11

Not on your lists

9299..10057
DNA (759bp) protein (253aa)
ApbE family lipoprotein Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DZT4_DICTD
Marine sediment metagenome DNA, contig: S03H2_L03302 {ECO:0000313|EMBL:GAH40302.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ApbE family lipoprotein
QC4_scaffold_1564_12
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(10083..11366)
DNA (1284bp) protein (428aa)
seryl-tRNA synthase Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B41120
seryl-tRNA synthetase
Tax=CG_Elusi_05
QC4_scaffold_1564_13
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

11698..12813
DNA (1116bp) protein (372aa)
RNA polymerase factor sigma-54 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
QC4_scaffold_1564_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13373..13831)
DNA (459bp) protein (153aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Clostridium botulinum NCTC 2916 RepID=B1QBH5_CLOBO
moaC; molybdenum cofactor biosynthesis protein MoaC
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum CDC_1436.;"
QC4_scaffold_1564_15
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13855..14814)
DNA (960bp) protein (320aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
Cyclic pyranopterin monophosphate synthase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8W9_THEID
molybdenum cofactor biosynthesis protein A
QC4_scaffold_1564_16
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

14941..15642
DNA (702bp) protein (234aa)
Phosphate regulon transcriptional regulatory protein PhoB (SphR) Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CG33_9CLOT
winged helix family two component transcriptional regulator
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1564_17
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

16505..17947
DNA (1443bp) protein (481aa)
Metal dependent phosphohydrolase with GAF sensor Tax=Caldithrix abyssi DSM 13497 RepID=H1XRX6_9BACT
metal dependent phosphohydrolase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1564_18
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

18276..18527
DNA (252bp) protein (84aa)
translation elongation factor-like protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=CG_Elusi_05
QC4_scaffold_1564_19

Not on your lists

18571..18939
DNA (369bp) protein (123aa)
Putative uncharacterized protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJD9_THEYD
Marine sediment metagenome DNA, contig: S06H3_C01278 {ECO:0000313|EMBL:GAH94205.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
QC4_scaffold_1564_20
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

19664..21319
DNA (1656bp) protein (552aa)
Lipoprotein LipL45 bin=GWB1_CP_36_13 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
FecR family protein
Tax=CG_Elusi_05
QC4_scaffold_1564_21
unknown

Not on your lists

21431..21694
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying 22 items

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