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QC4_scaffold_3397

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_3397_1
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1..531)
DNA (531bp) protein (177aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short=HMP-P synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMP-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Short=HMPP synthase {ECO:0000255|HAMAP-Rule:MF_00089};; Thiamine biosynthesis protein ThiC {ECO:0000255|HAMAP-Rule:MF_00089}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Phosphomethylpyrimidine synthase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=THIC_THEYD
thiC; thiamine biosynthesis protein ThiC
QC4_scaffold_3397_2
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(985..1626)
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXW0_9BACT
thiamine-phosphate pyrophosphorylase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
QC4_scaffold_3397_3
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1611..2021)
DNA (411bp) protein (137aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_3397_4
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(2018..2470)
DNA (453bp) protein (151aa)
waaE; D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase (EC:2.7.-.-)
Bifunctional protein RfaE, domain II bin=GWB2_Ignavibacteria_35_12 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RBG_16_Zixibacteria_43_9_curated
QC4_scaffold_3397_5
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(2476..3066)
DNA (591bp) protein (197aa)
phosphoheptose isomerase Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F10D
phosphoheptose isomerase
Tax=CG_CP01_01
QC4_scaffold_3397_6
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3053..4426)
DNA (1374bp) protein (458aa)
Biotin carboxylase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZI8_UNCTG
biotin carboxylase
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_3397_7
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(4430..4915)
DNA (486bp) protein (162aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJ31_THEYD
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein
Tax=CG_Elusi_05
QC4_scaffold_3397_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(4940..7732)
DNA (2793bp) protein (931aa)
Pyruvate phosphate dikinase Tax=Melioribacter roseus (strain P3M) RepID=I7A1H4_MELRP
pyruvate phosphate dikinase
Tax=RBG_16_Spirochaete_67_19_curated
QC4_scaffold_3397_9
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7803..8528)
DNA (726bp) protein (242aa)
formyl transferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B43428
formyl transferase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
QC4_scaffold_3397_10
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9129..10097)
DNA (969bp) protein (323aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase bin=GWF2_OP3_43_52 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_3397_11
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(10084..11394)
DNA (1311bp) protein (437aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C4I8_THEGP
Tax=CG_Elusi_05
QC4_scaffold_3397_12
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11736..12686)
DNA (951bp) protein (317aa)
Radical SAM domain-containing protein Tax=Methanobacterium sp. MB1 RepID=U6ECB9_9EURY
Radical SAM domain-containing protein
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
Displaying 12 items

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