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QC4_scaffold_2449

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_2449_1
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3..509)
DNA (507bp) protein (169aa)
Protein translocase subunit SecD bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
protein translocase subunit SecD
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_2449_2
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(1083..1754)
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0M5_UNCTG
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_2449_3
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(1762..2175)
DNA (414bp) protein (138aa)
Preprotein translocase, YajC subunit bin=GWB2_Proteobacteria_55_19 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_2449_4
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

2290..3330
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Thermotoga thermarum DSM 5069 RepID=F7YWW8_9THEM
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
QC4_scaffold_2449_5

Not on your lists

3341..3985
DNA (645bp) protein (215aa)
nitroreductase Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B598A1
Marine sediment metagenome DNA, contig: S01H1_L06071 {ECO:0000313|EMBL:GAF70817.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitroreductase
QC4_scaffold_2449_6
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3986..4420)
DNA (435bp) protein (145aa)
id=2740057 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_2449_7
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(4442..5671)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001744B96
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_2449_8
unknown

Not on your lists

comp(5668..5850)
DNA (183bp) protein (61aa)

This feature has no annotations

QC4_scaffold_2449_9
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5859..6530)
DNA (672bp) protein (224aa)
CRP/FNR family transcriptional regulator Tax=Clostridium pasteurianum DSM 525 RepID=L7EKM4_CLOPA
CRP/FNR family transcriptional regulator
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_2449_10
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(6546..7139)
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDA3_DEFDS
hypothetical protein
Tax=CG_Elusi_05
QC4_scaffold_2449_11
unknown

Not on your lists

comp(7142..7624)
DNA (483bp) protein (161aa)

This feature has no annotations

QC4_scaffold_2449_12
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7673..8089)
DNA (417bp) protein (139aa)
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000255|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000255|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00122};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=GATC_THEYD
QC4_scaffold_2449_13
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8435..9064)
DNA (630bp) protein (210aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D Tax=Clostridium tetani RepID=Q896K2_CLOTE
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271, ECO:0000313|EMBL:CDI49072.1}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
QC4_scaffold_2449_14
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(9065..10453)
DNA (1389bp) protein (463aa)
V-type ATP synthase beta chain Tax=Thermobrachium celere DSM 8682 RepID=R7RQT8_9CLOT
H+transporting two-sector ATPase alpha/beta subunit
Tax=CG_Elusi_05
QC4_scaffold_2449_15
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(10486..10857)
DNA (372bp) protein (124aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4Z4_9BACT
Tax=CG_Elusi_05
QC4_scaffold_2449_16
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(10891..11784)
DNA (894bp) protein (298aa)
Homoserine dehydrogenase Tax=Halanaerobium hydrogeniformans RepID=E4RK69_HALHG
homoserine dehydrogenase
Tax=CG_Elusi_05
QC4_scaffold_2449_17
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11787..12995)
DNA (1209bp) protein (403aa)
diaminopimelate aminotransferase Tax=Thermodesulfatator atlanticus RepID=UPI0003B4E2E1
LL-diaminopimelate aminotransferase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_2449_18
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13031..13306)
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QRR8_PERMH
histone family protein DNA-binding protein
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_2449_19
unknown

Not on your lists

comp(14007..14285)
DNA (279bp) protein (93aa)

This feature has no annotations

QC4_scaffold_2449_20
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(14239..15735)
DNA (1497bp) protein (499aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
QC4_scaffold_2449_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15815..16357)
DNA (543bp) protein (181aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
Displaying 21 items

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