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QC4_scaffold_2787

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_2787_1

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58..2076
DNA (2019bp) protein (673aa)
alcdhyde ferredoxin oxidoreductase (EC:1.2.7.5)
Marine sediment metagenome DNA, contig: S01H4_C00314 {ECO:0000313|EMBL:GAG70383.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Aldehyde ferredoxin oxidoreductase bin=GWD2_Chloroflexi_49_16 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
QC4_scaffold_2787_2
CG_Elusi_05, Elusimicrobia, Bacteria

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2097..3056
DNA (960bp) protein (320aa)
radical SAM protein Tax=Desulfospira joergensenii RepID=UPI0003B5F656
radical SAM domain-containing protein
Tax=CG_Elusi_05
QC4_scaffold_2787_3
CG_Elusi_05, Elusimicrobia, Bacteria

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3273..3692
DNA (420bp) protein (140aa)
Tax=CG_Elusi_05
QC4_scaffold_2787_4
GWC2_OP9X_49_35_curated, OP9X, Bacteria

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3798..4877
DNA (1080bp) protein (360aa)
Peptidase C14, caspase catalytic subunit P20 Tax=uncultured bacterium RepID=K2B5U5_9BACT
hypothetical protein
Tax=GWC2_OP9X_49_35_curated
QC4_scaffold_2787_5
Desulfurococcus mucosus, Desulfurococcus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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4902..6101
DNA (1200bp) protein (400aa)
Dihydroorotate dehydrogenase family protein Tax=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) RepID=E8R9H1_DESM0
dihydroorotate dehydrogenase family protein
Dihydroorotate dehydrogenase family protein {ECO:0000313|EMBL:ADV65147.1}; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Desulfurococcus.;" source="Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 /; O7/1).;"
QC4_scaffold_2787_6

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6142..7419
DNA (1278bp) protein (426aa)
Glutamate dehydrogenase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL6_THET1
Marine sediment metagenome DNA, contig: S03H2_C00420 {ECO:0000313|EMBL:GAH20468.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glu/Leu/Phe/Val dehydrogenase
QC4_scaffold_2787_7
CG_Elusi_05, Elusimicrobia, Bacteria

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7909..8694
DNA (786bp) protein (262aa)
LysM domain-containing protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Peptidoglycan-binding lysin domain
Tax=CG_Elusi_05
QC4_scaffold_2787_8
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

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8709..9098
DNA (390bp) protein (130aa)
Tol-pal system protein YbgF Tax=Proteus penneri ATCC 35198 RepID=C0B245_9ENTR
hypothetical protein
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_2787_9
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

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9104..9946
DNA (843bp) protein (281aa)
endopeptidase LytE (EC:3.4.-.-)
Probable endopeptidase LytE bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_2787_10
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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9952..10389
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FVS9_DESHD
XRE family transcriptional regulator
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_2787_11
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

10399..11532
DNA (1134bp) protein (378aa)
DNA processing protein DprA bin=GWF2_Nitrospirae_44_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DNA protecting protein DprA
Tax=CG_Elusi_05
QC4_scaffold_2787_12
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

11563..13452
DNA (1890bp) protein (630aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T4W0_THEA1
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_2787_13
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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13415..14359
DNA (945bp) protein (315aa)
tyrosine recombinase XerC Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B76D0D
tyrosine recombinase XerC
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_2787_14
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

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14382..15074
DNA (693bp) protein (231aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
Displaying 14 items

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