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S0_scaffold_208_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_208_curated_trna_1
unknown

Not on your lists

154..227
DNA (74bp)
transferRNA Ile
S0_scaffold_208_curated_trna_2
unknown

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246..319
DNA (74bp)
transferRNA Ala
S0_scaffold_208_curated_1
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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454..1857
DNA (1404bp) protein (468aa)
Glycosyl hydrolase family 109 protein 1 (EC:3.2.1.-)
Alpha-N-acetylgalactosaminidase id=2132984 bin=GWE2_Bacteroidetes_40_15 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_2
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

1885..3273
DNA (1389bp) protein (463aa)
Putative capsule biosynthesis protein CapA id=2133020 bin=GWE2_Bacteroidetes_40_15 species=Legionella longbeachae genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
capsule biosynthesis protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_3
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(3290..5911)
DNA (2622bp) protein (874aa)
PGAP1 family protein id=2133022 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_4
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(5982..7823)
DNA (1842bp) protein (614aa)
id=2133023 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_5
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(7946..8965)
DNA (1020bp) protein (340aa)
add; adenosine deaminase (EC:3.5.4.4) rbh
Adenine deaminase id=2133024 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_6
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

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comp(8968..10053)
DNA (1086bp) protein (362aa)
Putative exported protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LJ37_BACFN
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
S0_scaffold_208_curated_7
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(10105..10536)
DNA (432bp) protein (144aa)
Putative uncharacterized protein id=4091329 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_8
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

10709..11296
DNA (588bp) protein (196aa)
opacity protein id=2133027 bin=GWE2_Bacteroidetes_40_15 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
opacity protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_9
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

11345..12409
DNA (1065bp) protein (355aa)
Histidine kinase family protein id=2133029 bin=GWE2_Bacteroidetes_40_15 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_10
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

12434..13189
DNA (756bp) protein (252aa)
Response regulator id=2133031 bin=GWE2_Bacteroidetes_40_15 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_11
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(13204..14163)
DNA (960bp) protein (320aa)
threonine synthase (EC:4.2.3.1)
threonine synthase id=2133033 bin=GWE2_Bacteroidetes_40_15 species=Halobacillus sp. BAB-2008 genus=Halobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_12
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(14274..14996)
DNA (723bp) protein (241aa)
Uncharacterized protein id=2133035 bin=GWE2_Bacteroidetes_40_15 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_13
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

15251..16396
DNA (1146bp) protein (382aa)
Putative uncharacterized protein id=2133038 bin=GWE2_Bacteroidetes_40_15 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
Porin subfamily
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_14
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(16410..16916)
DNA (507bp) protein (169aa)
Putative uncharacterized protein id=2133041 bin=GWE2_Bacteroidetes_40_15 species=Bacteroides eggerthii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_15
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(16931..17281)
DNA (351bp) protein (117aa)
Uncharacterized protein id=4091321 bin=GWF2_Bacteroidetes_41_61 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_16
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(17285..17830)
DNA (546bp) protein (182aa)
RNA polymerase sigma factor id=2133047 bin=GWE2_Bacteroidetes_40_15 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
RNA polymerase ECF-type sigma factor
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_17
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

17997..18830
DNA (834bp) protein (278aa)
id=4091319 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_18
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(18897..19871)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=2133051 bin=GWE2_Bacteroidetes_40_15 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_19
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(20005..20931)
DNA (927bp) protein (309aa)
Quinolinate synthetase complex, A subunit id=2133055 bin=GWE2_Bacteroidetes_40_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_20
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(20950..23496)
DNA (2547bp) protein (849aa)
L-aspartate oxidase id=2133058 bin=GWE2_Bacteroidetes_40_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_21
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

23600..25072
DNA (1473bp) protein (491aa)
Putative uncharacterized protein id=2133061 bin=GWE2_Bacteroidetes_40_15 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
glycosyl transferase rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_22
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

25078..26043
DNA (966bp) protein (322aa)
Putative uncharacterized protein id=4091314 bin=GWF2_Bacteroidetes_41_61 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_23
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

26045..27358
DNA (1314bp) protein (438aa)
Putative uncharacterized protein id=4091313 bin=GWF2_Bacteroidetes_41_61 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_24
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

27387..29261
DNA (1875bp) protein (625aa)
Uncharacterized protein id=2133072 bin=GWE2_Bacteroidetes_40_15 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_25
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

29294..30526
DNA (1233bp) protein (411aa)
Putative uncharacterized protein id=2133076 bin=GWE2_Bacteroidetes_40_15 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_26
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

30926..32128
DNA (1203bp) protein (401aa)
Uncharacterized protein id=2133079 bin=GWE2_Bacteroidetes_40_15 species=Bacteroides intestinalis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
S0_scaffold_208_curated_27
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

32214..32495
DNA (282bp) protein (94aa)
Transcriptional regulator id=2008081 bin=GWE2_Bacteroidetes_40_15 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Transcriptional regulator, XRE family
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_208_curated_28
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

32497..33747
DNA (1251bp) protein (417aa)
HipA domain protein id=2008079 bin=GWE2_Bacteroidetes_40_15 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
toxin HipA
Tax=BJP_08E140C01_Bacteroidetes_41_49
Displaying items 1-30 of 42 in total

View Taxonomy