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S0_scaffold_544_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_544_curated_1
unknown

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47..274
DNA (228bp) protein (76aa)

This feature has no annotations

S0_scaffold_544_curated_2
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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641..1861
DNA (1221bp) protein (407aa)
Thioredoxin domain-containing protein id=1902749 bin=GWE2_Bacteroidetes_40_15 species=gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
thioredoxin
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_3
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(1875..2414)
DNA (540bp) protein (180aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=1902750 bin=GWE2_Bacteroidetes_40_15 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
RNA polymerase, sigma-24 subunit, ECF subfamily
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_4
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

2746..4020
DNA (1275bp) protein (425aa)
Uncharacterized protein id=4335525 bin=GWF2_Bacteroidetes_41_61 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
anti-FecI sigma factor, FecR
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_5
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

4173..7577
DNA (3405bp) protein (1135aa)
TonB-dependent receptor plug id=4335524 bin=GWF2_Bacteroidetes_41_61 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
TonB-dependent receptor plug
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_6
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

7610..9070
DNA (1461bp) protein (487aa)
Putative uncharacterized protein id=4335523 bin=GWF2_Bacteroidetes_41_61 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_7
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

9082..9840
DNA (759bp) protein (253aa)
Putative uncharacterized protein id=4335522 bin=GWF2_Bacteroidetes_41_61 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_8
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

9853..11403
DNA (1551bp) protein (517aa)
Putative uncharacterized protein id=4335521 bin=GWF2_Bacteroidetes_41_61 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_9
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(11670..12350)
DNA (681bp) protein (227aa)
ABC transporter related protein id=1902756 bin=GWE2_Bacteroidetes_40_15 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
ABC transporter
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_10
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(12335..13111)
DNA (777bp) protein (259aa)
Binding-protein-dependent transport systems inner membrane component id=4335519 bin=GWF2_Bacteroidetes_41_61 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_11
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(13074..14078)
DNA (1005bp) protein (335aa)
NMT1/THI5 like domain protein id=4335518 bin=GWF2_Bacteroidetes_41_61 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118 rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_12
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

14278..14520
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=1902800 bin=GWE2_Bacteroidetes_40_15 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
CopG family transcriptional regulator
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_13
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

14526..16805
DNA (2280bp) protein (760aa)
TonB-dependent outer-membrane uptake protein id=1902806 bin=GWE2_Bacteroidetes_40_15 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_14
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(16829..18148)
DNA (1320bp) protein (440aa)
Uncharacterized protein id=1902809 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
putative ATPase rbh
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_15
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(18411..19709)
DNA (1299bp) protein (433aa)
Multi-sensor hybrid histidine kinase id=4524928 bin=GWF2_Bacteroidetes_40_14 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
putative multi-sensor hybrid histidine kinase
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_16
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(19810..20202)
DNA (393bp) protein (131aa)
Uncharacterized protein id=1902811 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S0_scaffold_544_curated_17
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(20186..20452)
DNA (267bp) protein (89aa)
Uncharacterized protein id=1902813 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
Displaying 17 items

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