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S0_scaffold_576_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_576_curated_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

S0_scaffold_576_curated_2
unknown

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72..314
DNA (243bp) protein (81aa)

This feature has no annotations

S0_scaffold_576_curated_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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280..1620
DNA (1341bp) protein (447aa)
Radical SAM domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7H4_GEOUR rbh
radical SAM domain-containing protein rbh
Radical SAM domain protein {ECO:0000313|EMBL:ABQ27742.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
S0_scaffold_576_curated_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1920..2792
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=3583208 bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_5
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2852..3289
DNA (438bp) protein (146aa)
CMP/dCMP deaminase zinc-binding id=3583207 bin=GWF2_Geobacter_54_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
zinc-dependent cytosine deaminase
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_6
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3326..3850)
DNA (525bp) protein (175aa)
id=1964350 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_576_curated_7
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3867..4451)
DNA (585bp) protein (195aa)
Uncharacterized protein id=1964348 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_576_curated_8
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4467..4742)
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAY3_GEOLS
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ACD93967.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S0_scaffold_576_curated_9
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4883..8125)
DNA (3243bp) protein (1081aa)
Serine phosphatase id=4646582 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
sodium/solute symporter serine/threonine phosphatase domain-containing protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_10
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8361..9032
DNA (672bp) protein (224aa)
Menaquinol oxidoreductase complex Cbc5, cytochrome c subunit, putative, HAMP domain-containing, 2 heme-binding sites id=4646583 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
cbcD; menaquinol oxidoreductase complex Cbc5, cytochrome c subunit, putative, HAMP domain-containing, 2 heme-binding sites
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_11
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9117..9737
DNA (621bp) protein (207aa)
Cytochrome b/b6 domain protein id=4951531 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
cytochrome b/b6 protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_12
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9734..10150
DNA (417bp) protein (139aa)
Menaquinol oxidoreductase complex Cbc6, membrane protein subunit, putative id=2005631 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
cytochrome B6
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_576_curated_13
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10126..10935
DNA (810bp) protein (270aa)
Menaquinol oxidoreductase complex Cbc6, lipoprotein cytochrome c subunit id=2005633 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
cbcR; menaquinol oxidoreductase complex Cbc6, lipoprotein cytochrome c subunit
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_14
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11295..11723
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WM01_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW11721.1}; Flags: Precursor;; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
S0_scaffold_576_curated_15
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11797..12609)
DNA (813bp) protein (271aa)
Pyrroline-5-carboxylate reductase id=2180767 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
pyrroline-5-carboxylate reductase rbh
Tax=GWC2_Geobacteraceae_48_7_curated
S0_scaffold_576_curated_16
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12729..13109)
DNA (381bp) protein (127aa)
Uncharacterized protein id=2180765 bin=GWB2_Pelobacter_53_15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_17
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13103..13966)
DNA (864bp) protein (288aa)
YdjC family protein id=2180762 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
hypothetical protein rbh
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_576_curated_18
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13963..15393)
DNA (1431bp) protein (477aa)
Radical SAM domain protein id=2180760 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
radical SAM domain-containing protein rbh
Tax=GWB2_Geobacteraceae_52_12_curated
S0_scaffold_576_curated_19
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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15533..17554
DNA (2022bp) protein (674aa)
Sensor histidine kinase id=3840672 bin=GWC2_Geobacteraceae_55_20 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
sensor histidine kinase
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_576_curated_20
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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17555..18202
DNA (648bp) protein (216aa)
Helix-turn-helix transcriptional response regulator, LuxR family id=4501080 bin=GWF2_Geobacter_54_21 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
two component LuxR family transcriptional regulator
Tax=GWC2_Geobacteraceae_53_11_curated
S0_scaffold_576_curated_21
unknown

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19102..19536
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying 21 items

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