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S0_scaffold_137_curated

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S0_scaffold_137_curated_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..97
DNA (96bp) protein (32aa)
tuf; elongation factor Tu
Elongation factor Tu id=1749241 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
S0_scaffold_137_curated_2
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


117..425
DNA (309bp) protein (103aa)
30S ribosomal protein S10 id=4399934 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
rpsJ; 30S ribosomal protein S10
Tax=GWC2_Geobacteraceae_55_20_curated
S0_scaffold_137_curated_3
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


452..1081
DNA (630bp) protein (210aa)
50S ribosomal protein L3 id=1749290 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
rplC; 50S ribosomal protein L3 rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1104..1727
DNA (624bp) protein (208aa)
50S ribosomal protein L4 id=1749292 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
rplD; 50S ribosomal protein L4 rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_5
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1724..2008
DNA (285bp) protein (95aa)
50S ribosomal protein L23 id=2174637 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
rplW; 50S ribosomal protein L23
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2030..2854
DNA (825bp) protein (275aa)
50S ribosomal protein L2 id=2174656 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
rplB; 50S ribosomal protein L2 rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_7
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2873..3151
DNA (279bp) protein (93aa)
30S ribosomal protein S19 id=1749298 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpsS; 30S ribosomal protein S19
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_8
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3166..3501
DNA (336bp) protein (112aa)
50S ribosomal protein L22 id=2174660 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
rplV; 50S ribosomal protein L22
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_9
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3524..4156
DNA (633bp) protein (211aa)
30S ribosomal protein S3 id=1749302 bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
rpsC; 30S ribosomal protein S3 rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_10
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4189..4611
DNA (423bp) protein (141aa)
50S ribosomal protein L16 id=2174665 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
rplP; 50S ribosomal protein L16
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_11
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4601..4789
DNA (189bp) protein (63aa)
50S ribosomal protein L29 id=1749306 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
50S ribosomal protein L29
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_12
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4800..5057
DNA (258bp) protein (86aa)
30S ribosomal protein S17 id=1749308 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpsQ; 30S ribosomal protein S17
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_13
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5075..5443
DNA (369bp) protein (123aa)
50S ribosomal protein L14 id=1749310 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rplN; 50S ribosomal protein L14
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_14
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5465..5791
DNA (327bp) protein (109aa)
50S ribosomal protein L24 id=1749312 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rplX; 50S ribosomal protein L24
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_15
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5809..6348
DNA (540bp) protein (180aa)
50S ribosomal protein L5 id=2174676 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
rplE; 50S ribosomal protein L5 rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_16
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6591..6989
DNA (399bp) protein (133aa)
30S ribosomal protein S8 id=1749316 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpsH; 30S ribosomal protein S8
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_17
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7016..7555
DNA (540bp) protein (180aa)
50S ribosomal protein L6 id=1847975 bin=GWB2_Geobacter-like_52_12 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good rbh
rplF; 50S ribosomal protein L6
Tax=GWB2_Geobacteraceae_52_12_curated
S0_scaffold_137_curated_18
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7575..7940
DNA (366bp) protein (122aa)
50S ribosomal protein L18 id=2154828 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rplR; 50S ribosomal protein L18
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_19
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7961..8449
DNA (489bp) protein (163aa)
30S ribosomal protein S5 id=2154779 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
rpsE; 30S ribosomal protein S5
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_20
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8471..8647
DNA (177bp) protein (59aa)
50S ribosomal protein L30 id=2174683 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
50S ribosomal protein L30
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_21
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8665..9108
DNA (444bp) protein (148aa)
50S ribosomal protein L15 id=2174684 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
rplO; 50S ribosomal protein L15
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_22
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9108..10415
DNA (1308bp) protein (436aa)
Protein translocase subunit SecY id=2154770 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
secY; preprotein translocase subunit SecY rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_23
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..11079
DNA (663bp) protein (221aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase id=2174686 bin=GWB2_Pelobacter_53_15 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_24
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11066..11812
DNA (747bp) protein (249aa)
Methionine aminopeptidase id=2154763 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
methionine aminopeptidase rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_25
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11833..11946
DNA (114bp) protein (38aa)
50S ribosomal protein L36 id=2154761 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpmJ; 50S ribosomal protein L36
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_26
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11969..12337
DNA (369bp) protein (123aa)
30S ribosomal protein S13 id=2154759 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpsM; 30S ribosomal protein S13
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_27
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12363..12758
DNA (396bp) protein (132aa)
30S ribosomal protein S11 id=2154757 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
30S ribosomal protein S11
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_28
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12834..13412
DNA (579bp) protein (193aa)
30S ribosomal protein S4 id=2154755 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
rpsD; 30S ribosomal protein S4 rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_29
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13483..14505
DNA (1023bp) protein (341aa)
DNA-directed RNA polymerase subunit alpha id=2154753 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria rbh
DNA-directed RNA polymerase subunit alpha rbh
Tax=GWD2_Desulfuromonadales_54_10_curated
S0_scaffold_137_curated_30
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14545..15054
DNA (510bp) protein (170aa)
50S ribosomal protein L17 id=2154751 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
50S ribosomal protein L17
Tax=GWD2_Desulfuromonadales_54_10_curated
Displaying items 1-30 of 78 in total

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