name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S1_scaffold_75_curated_1
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..821)
|
Citrate utilization protein B n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SQ8_RHOFD
rbh
citrate utilization protein B
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(808..2268)
|
Precorrin 3B synthase CobZ n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SQ9_RHOFD
rbh
tricarballylate dehydrogenase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_3
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2275..3627)
|
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR0_RHOFD
rbh
fumarate lyase
rbh
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
|
|
S1_scaffold_75_curated_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3651..4487)
|
HpcH/HpaI aldolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR1_RHOFD
rbh
HpcH/HpaI aldolase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_5
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4493..5674)
|
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR2_RHOFD
rbh
L-carnitine dehydratase/bile acid-inducible protein F
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5684..6529)
|
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR3_RHOFD
rbh
hypothetical protein
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6596..7879)
|
TRAP dicarboxylate transporter-DctM subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR4_RHOFD
rbh
TRAP dicarboxylate transporter subunit DctM
rbh
TRAP dicarboxylate transporter-DctM subunit {ECO:0000313|EMBL:ABD71189.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7876..8541)
|
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR5_RHOFD
rbh
tripartite ATP-independent periplasmic transporter DctQ
rbh
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABD71188.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_9
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8631..9653)
|
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR6_RHOFD
rbh
TRAP dicarboxylate transporter subunit DctP
rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABD71187.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_10
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9831..10733
|
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR7_RHOFD
rbh
LysR family transcriptional regulator
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_11
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10865..11182)
|
Transposase IS66 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UX7_RHOFD
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ABD70426.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11264..12220)
|
oxidoreductase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037B0CF6
rbh
oxidoreductase-like protein
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12221..13087)
|
Protocatechuate 4,5-dioxygenase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4V1_9BURK
rbh
protocatechuate 4,5-dioxygenase subunit beta
rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
|
|
S1_scaffold_75_curated_14
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13089..13532)
|
Protocatechuate 4,5-dioxygenase alpha subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNV9_POLNA
protocatechuate 4,5-dioxygenase subunit alpha
Protocatechuate 4,5-dioxygenase subunit alpha {ECO:0000313|EMBL:BAO29041.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
|
|
S1_scaffold_75_curated_15
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13593..14534)
|
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031EE432
rbh
amidohydrolase 2
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_16
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14535..15461)
|
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G3_RHOFD
rbh
6-phosphogluconate dehydrogenase
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_17
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15580..16263)
|
Dimethylmenaquinone methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G2_RHOFD
rbh
hypothetical protein
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_18
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16260..17291)
|
Amidohydrolase 2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G1_RHOFD
rbh
amidohydrolase 2
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_19
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17310..18515)
|
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
rbh
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G0_RHOFD
rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
|
|
S1_scaffold_75_curated_20
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18557..19216)
|
Putative ABC transporter, periplasmic molybdate binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222F9_RHOFD
rbh
putative ABC transporter periplasmic molybdate-binding protein
rbh
Putative ABC transporter, periplasmic molybdate binding protein {ECO:0000313|EMBL:ABD68094.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19372..20283
|
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222F8_RHOFD
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD68095.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20297..21115
|
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3CYG2_9BURK
rbh
GntR family transcriptional regulator
rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
|
|
S1_scaffold_75_curated_23
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21326..22498
|
Extracellular ligand-binding receptor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222L0_RHOFD
rbh
extracellular ligand-binding receptor
rbh
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
|
|
S1_scaffold_75_curated_24
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22669..23541
|
Inner-membrane translocator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K9_RHOFD
rbh
inner-membrane translocator
rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABD68044.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_25
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23541..24515
|
Inner-membrane translocator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K8_RHOFD
rbh
inner-membrane translocator
rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABD68045.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24512..25390
|
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K7_RHOFD
rbh
ABC transporter-like protein
rbh
ABC transporter related {ECO:0000313|EMBL:ABD68046.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_27
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25383..26108
|
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K6_RHOFD
rbh
ABC transporter-like protein
rbh
ABC transporter related {ECO:0000313|EMBL:ABD68047.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
|
|
S1_scaffold_75_curated_28
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26135..26719
|
Hemerythrin HHE cation binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K5_RHOFD
rbh
hemerythrin HHE cation-binding protein
rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
|
|
S1_scaffold_75_curated_29
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26716..27414)
|
Alpha/beta hydrolase fold protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KX82_9BURK
rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EYC50888.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
alpha/beta hydrolase
|
|
S1_scaffold_75_curated_30
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27452..28417)
|
Ferredoxin n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQU8_POLNA
rbh
ferredoxin
rbh
Ferredoxin {ECO:0000313|EMBL:ABM38026.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
|