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S1_scaffold_75_curated

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Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_75_curated_1
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..821)
DNA (819bp) protein (273aa)
Citrate utilization protein B n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SQ8_RHOFD rbh
citrate utilization protein B rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(808..2268)
DNA (1461bp) protein (487aa)
Precorrin 3B synthase CobZ n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SQ9_RHOFD rbh
tricarballylate dehydrogenase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_3
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2275..3627)
DNA (1353bp) protein (451aa)
3-carboxy-cis,cis-muconate cycloisomerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR0_RHOFD rbh
fumarate lyase rbh
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
S1_scaffold_75_curated_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3651..4487)
DNA (837bp) protein (279aa)
HpcH/HpaI aldolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR1_RHOFD rbh
HpcH/HpaI aldolase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_5
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4493..5674)
DNA (1182bp) protein (394aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR2_RHOFD rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5684..6529)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR3_RHOFD rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..7879)
DNA (1284bp) protein (428aa)
TRAP dicarboxylate transporter-DctM subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR4_RHOFD rbh
TRAP dicarboxylate transporter subunit DctM rbh
TRAP dicarboxylate transporter-DctM subunit {ECO:0000313|EMBL:ABD71189.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7876..8541)
DNA (666bp) protein (222aa)
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR5_RHOFD rbh
tripartite ATP-independent periplasmic transporter DctQ rbh
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABD71188.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_9
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8631..9653)
DNA (1023bp) protein (341aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR6_RHOFD rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ABD71187.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_10
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9831..10733
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SR7_RHOFD rbh
LysR family transcriptional regulator rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_11
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10865..11182)
DNA (318bp) protein (106aa)
Transposase IS66 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UX7_RHOFD
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:ABD70426.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_12
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11264..12220)
DNA (957bp) protein (319aa)
oxidoreductase n=1 Tax=Curvibacter lanceolatus RepID=UPI00037B0CF6 rbh
oxidoreductase-like protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12221..13087)
DNA (867bp) protein (289aa)
Protocatechuate 4,5-dioxygenase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I4V1_9BURK rbh
protocatechuate 4,5-dioxygenase subunit beta rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
S1_scaffold_75_curated_14
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13089..13532)
DNA (444bp) protein (148aa)
Protocatechuate 4,5-dioxygenase alpha subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNV9_POLNA
protocatechuate 4,5-dioxygenase subunit alpha
Protocatechuate 4,5-dioxygenase subunit alpha {ECO:0000313|EMBL:BAO29041.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
S1_scaffold_75_curated_15
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13593..14534)
DNA (942bp) protein (314aa)
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031EE432 rbh
amidohydrolase 2 rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_16
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14535..15461)
DNA (927bp) protein (309aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G3_RHOFD rbh
6-phosphogluconate dehydrogenase rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_17
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15580..16263)
DNA (684bp) protein (228aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G2_RHOFD rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_18
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16260..17291)
DNA (1032bp) protein (344aa)
Amidohydrolase 2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G1_RHOFD rbh
amidohydrolase 2 rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_19
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17310..18515)
DNA (1206bp) protein (402aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2) rbh
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222G0_RHOFD rbh
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
S1_scaffold_75_curated_20
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18557..19216)
DNA (660bp) protein (220aa)
Putative ABC transporter, periplasmic molybdate binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222F9_RHOFD rbh
putative ABC transporter periplasmic molybdate-binding protein rbh
Putative ABC transporter, periplasmic molybdate binding protein {ECO:0000313|EMBL:ABD68094.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19372..20283
DNA (912bp) protein (304aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222F8_RHOFD rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD68095.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20297..21115
DNA (819bp) protein (273aa)
Transcriptional regulator n=1 Tax=Polaromonas sp. CF318 RepID=J3CYG2_9BURK rbh
GntR family transcriptional regulator rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
S1_scaffold_75_curated_23
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21326..22498
DNA (1173bp) protein (391aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222L0_RHOFD rbh
extracellular ligand-binding receptor rbh
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
S1_scaffold_75_curated_24
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22669..23541
DNA (873bp) protein (291aa)
Inner-membrane translocator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K9_RHOFD rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABD68044.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_25
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23541..24515
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K8_RHOFD rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:ABD68045.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24512..25390
DNA (879bp) protein (293aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K7_RHOFD rbh
ABC transporter-like protein rbh
ABC transporter related {ECO:0000313|EMBL:ABD68046.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_27
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25383..26108
DNA (726bp) protein (242aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K6_RHOFD rbh
ABC transporter-like protein rbh
ABC transporter related {ECO:0000313|EMBL:ABD68047.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S1_scaffold_75_curated_28
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26135..26719
DNA (585bp) protein (195aa)
Hemerythrin HHE cation binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K5_RHOFD rbh
hemerythrin HHE cation-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S1_scaffold_75_curated_29
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26716..27414)
DNA (699bp) protein (233aa)
Alpha/beta hydrolase fold protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KX82_9BURK rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EYC50888.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
alpha/beta hydrolase
S1_scaffold_75_curated_30
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27452..28417)
DNA (966bp) protein (322aa)
Ferredoxin n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQU8_POLNA rbh
ferredoxin rbh
Ferredoxin {ECO:0000313|EMBL:ABM38026.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Displaying items 1-30 of 126 in total

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