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S1_scaffold_374_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_374_curated_1
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1069)
DNA (966bp) protein (322aa)
DNA/RNA non-specific endonuclease n=2 Tax=cellular organisms RepID=F6APL3_DELSC rbh
DNA/RNA non-specific endonuclease rbh
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:AEF91613.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_374_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1210..2421)
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APL2_DELSC rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KFJ10144.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
major facilitator superfamily protein rbh
S1_scaffold_374_curated_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2433..2780)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BTD0_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ10054.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_374_curated_4
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2894..3571)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APL0_DELSC rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP50474.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
hypothetical protein rbh
S1_scaffold_374_curated_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3763..5097)
DNA (1335bp) protein (445aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6APK9_DELSC rbh
two component, sigma54 specific, Fis family transcriptional regulator rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEF91609.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_374_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5082..6506)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD3_DELAS rbh
histidine kinase rbh
S1_scaffold_374_curated_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6807..7364
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD4_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX34699.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7380..8819
DNA (1440bp) protein (480aa)
Diguanylate phosphodiesterase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD5_DELAS rbh
diguanylate phosphodiesterase rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ABX34700.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_9
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8907..10181)
DNA (1275bp) protein (425aa)
Glycosyl transferase group 1 n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANR5_DELSC rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EZP50478.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
group 1 glycosyl transferase rbh
S1_scaffold_374_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10216..11610)
DNA (1395bp) protein (465aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD7_DELAS rbh
sigma-54 dependent trancsriptional regulator rbh
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABX34702.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11661..13937)
DNA (2277bp) protein (759aa)
Membrane protein-like protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD8_DELAS rbh
Membrane protein-like protein {ECO:0000313|EMBL:ABX34703.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
membrane protein rbh
S1_scaffold_374_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13954..14496)
DNA (543bp) protein (181aa)
TadE family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTD9_DELAS rbh
TadE family protein rbh
TadE family protein {ECO:0000313|EMBL:ABX34704.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14493..15008)
DNA (516bp) protein (172aa)
TadE family protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV41_DELAS rbh
TadE family protein rbh
TadE family protein {ECO:0000313|EMBL:ABX34705.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15042..15482)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV42_DELAS
Uncharacterized protein {ECO:0000313|EMBL:KFJ10907.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
S1_scaffold_374_curated_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15493..16521)
DNA (1029bp) protein (343aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANQ9_DELSC rbh
hypothetical protein rbh
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEF91599.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_374_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16524..17528)
DNA (1005bp) protein (335aa)
Type II secretion system protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV44_DELAS rbh
type II secretion system protein rbh
Type II secretion system protein {ECO:0000313|EMBL:ABX34708.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17613..18575)
DNA (963bp) protein (321aa)
Type II secretion system protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV45_DELAS rbh
type II secretion system protein rbh
Type II secretion system protein {ECO:0000313|EMBL:ABX34709.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_18
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18572..19894)
DNA (1323bp) protein (441aa)
Type II secretion system protein E n=2 Tax=Delftia RepID=A9BV46_DELAS rbh
type II secretion system protein E rbh
Type II/IV secretion system family protein {ECO:0000313|EMBL:KFJ09011.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_374_curated_19
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19902..21428)
DNA (1527bp) protein (509aa)
Flp pilus assembly protein ATPase CpaE-like protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV47_DELAS rbh
Flp pilus assembly protein ATPase CpaE-like protein rbh
Flp pilus assembly protein ATPase CpaE-like protein {ECO:0000313|EMBL:ABX34711.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_20
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21433..22944)
DNA (1512bp) protein (504aa)
Type II and III secretion system protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANQ4_DELSC rbh
type II and III secretion system protein rbh
Type II and III secretion system protein {ECO:0000313|EMBL:AEF91594.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
S1_scaffold_374_curated_21
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22970..24016)
DNA (1047bp) protein (349aa)
Flp pilus assembly protein CpaB n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV49_DELAS rbh
Flp pilus assembly protein CpaB rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:ABX34713.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_22
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24209..24778)
DNA (570bp) protein (190aa)
Peptidase A24A prepilin type IV n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV50_DELAS rbh
peptidase A24A prepilin type IV rbh
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:ABX34714.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_23
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24781..24957)
DNA (177bp) protein (59aa)
Flp/Fap pilin component n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV51_DELAS
Flp/Fap pilin component
Flp/Fap pilin component {ECO:0000313|EMBL:ABX34715.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25049..25225)
DNA (177bp) protein (59aa)
Flp/Fap pilin component n=2 Tax=Delftia RepID=A9BV52_DELAS
Flp/Fap pilin component
Flp/Fap pilin component family protein {ECO:0000313|EMBL:KFJ10422.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_374_curated_25
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25331..27067)
DNA (1737bp) protein (579aa)
Outer membrane efflux protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV53_DELAS rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EZP50494.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
outer membrane efflux protein rbh
S1_scaffold_374_curated_26
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27067..28443)
DNA (1377bp) protein (459aa)
Type I secretion membrane fusion protein, HlyD family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANP8_DELSC rbh
Membrane fusion protein LapC {ECO:0000313|EMBL:EZP50495.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
HlyD family type I secretion membrane fusion protein rbh
S1_scaffold_374_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28440..30302)
DNA (1863bp) protein (621aa)
ABC transporter related n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV55_DELAS rbh
ABC transporter related {ECO:0000313|EMBL:ABX34719.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
ABC transporter-like protein rbh
S1_scaffold_374_curated_28
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30402..33698)
DNA (3297bp) protein (1099aa)
Mur ligase middle domain protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV56_DELAS rbh
Mur ligase middle domain protein {ECO:0000313|EMBL:ABX34720.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Mur ligase middle domain-containing protein rbh
S1_scaffold_374_curated_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33736..34260)
DNA (525bp) protein (175aa)
OmpA/MotB domain protein n=2 Tax=Delftia RepID=A9BV57_DELAS rbh
OmpA/MotB domain-containing protein rbh
OmpA/MotB domain protein {ECO:0000313|EMBL:ABX34721.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_374_curated_30
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34343..35662)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BV58_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34722.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Displaying 30 items

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