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S1_scaffold_1002_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S1_scaffold_1002_curated_1
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..789
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2W7Y7_DELAC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD35823.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
S1_scaffold_1002_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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846..2345
DNA (1500bp) protein (500aa)
AMP-dependent synthetase and ligase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS34_DELAS rbh
AMP-dependent synthetase/ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABX33444.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_1002_curated_3
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2377..3162
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS35_DELAS rbh
Citrate synthase {ECO:0000313|EMBL:EZP48198.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
citrate synthase rbh
S1_scaffold_1002_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3211..4377
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WDF3_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD37321.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
L-carnitine dehydratase/bile acid-inducible protein F rbh
S1_scaffold_1002_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4414..5427
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS37_DELAS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABX33447.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_1002_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5439..6221
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS38_DELAS rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABX33448.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S1_scaffold_1002_curated_7
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6224..7150)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XBX2_DELAC rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KEH08164.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
LysR family transcriptional regulator rbh
S1_scaffold_1002_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7254..8372
DNA (1119bp) protein (373aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61) rbh
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=MNMA_DELAS rbh
S1_scaffold_1002_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8526..10085
DNA (1560bp) protein (520aa)
Beta-lactamase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS41_DELAS rbh
Beta-lactamase {ECO:0000313|EMBL:ABX33451.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
beta-lactamase rbh
S1_scaffold_1002_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10054..12042)
DNA (1989bp) protein (663aa)
Histidine kinase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BS42_DELAS rbh
Histidine kinase {ECO:0000313|EMBL:ABX33452.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
histidine kinase rbh
S1_scaffold_1002_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12048..12731)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ANS7_DELSC rbh
two component LuxR family transcriptional regulator rbh
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KFJ09061.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
S1_scaffold_1002_curated_12
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12923..13558
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=2 Tax=Delftia acidovorans RepID=A9BS43_DELAS rbh
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KFJ10318.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
TetR family transcriptional regulator rbh
S1_scaffold_1002_curated_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13574..15232)
DNA (1659bp) protein (553aa)
aldehyde dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI00030EB500 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEH12550.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
phenylacetic acid degradation protein paaN rbh
S1_scaffold_1002_curated_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15381..15497
DNA (117bp) protein (39aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
Phenylacetate-CoA ligase n=3 Tax=Delftia acidovorans RepID=A9BS45_DELAS
Displaying 14 items

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