name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S3_scaffold_0_curated_1
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(960..2315)
|
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
rbh
Tyrosine--tRNA ligase id=7719138 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
rbh
|
|
S3_scaffold_0_curated_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2340..3290)
|
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D923E8
rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK98871.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
rbh
|
|
S3_scaffold_0_curated_3
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
3448..4035
|
Uncharacterized protein id=7719140 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAT88572.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
|
|
S3_scaffold_0_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
4066..4653
|
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028953D3
Uncharacterized protein {ECO:0000313|EMBL:EAR25235.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
|
|
S3_scaffold_0_curated_5
unknown
|
Not on your lists |
5165..5305
|
This feature has no annotations |
|
S3_scaffold_0_curated_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(5447..12196)
|
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B9M7_9MICO
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE75134.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
|
|
S3_scaffold_0_curated_7
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(12377..13009)
|
3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
Putative 3-methyladenine DNA glycosylase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHD8_CLAMS
|
|
S3_scaffold_0_curated_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(13006..14439)
|
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
argH; argininosuccinate lyase (EC:4.3.2.1)
rbh
argininosuccinate lyase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287D716
rbh
|
|
S3_scaffold_0_curated_9
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(14463..15662)
|
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
argG; argininosuccinate synthase (EC:6.3.4.5)
rbh
Argininosuccinate synthase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=ASSY_CLAM3
rbh
|
|
S3_scaffold_0_curated_10
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(15698..16621)
|
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
rbh
ornithine carbamoyltransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B78F92
rbh
|
|
S3_scaffold_0_curated_11
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(16618..17832)
|
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
acetylornithine aminotransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B79502
rbh
acetylornithine aminotransferase
rbh
|
|
S3_scaffold_0_curated_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(17829..18695)
|
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;"
acetylglutamate kinase n=1 Tax=Agromyces italicus RepID=UPI0003B43BE3
|
|
S3_scaffold_0_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(18698..19849)
|
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.1 2.3.1.35)
rbh
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHM1_9ACTN
rbh
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
|
|
S3_scaffold_0_curated_14
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(19846..20892)
|
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
rbh
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000255|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000255|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00150}; Short=NAGSA dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00150};; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=ARGC_CLAMS
rbh
|
|
S3_scaffold_0_curated_15
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21179..21724
|
hypothetical protein SPAM21_11536 id=7719150 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD99235.1}; TaxID=1833 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
|
|
S3_scaffold_0_curated_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(21743..24265)
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
Phenylalanine--tRNA ligase beta subunit id=7719151 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
rbh
pheT; phenylalanyl-tRNA synthetase subunit beta
rbh
|
|
S3_scaffold_0_curated_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(24265..25305)
|
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Phenylalanine--tRNA ligase alpha subunit id=7719152 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
rbh
phenylalanyl-tRNA synthetase subunit alpha
rbh
|
|
S3_scaffold_0_curated_18
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25317..26237)
|
Glutamate permease n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHL6_9ACTN
rbh
Glutamate permease {ECO:0000313|EMBL:EAR25222.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
polar amino acid ABC transporter inner membrane subunit
|
|
S3_scaffold_0_curated_19
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26234..26881)
|
Glutamine transport system permease protein GlnP n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3H0_9MICO
rbh
Glutamine transport system permease protein GlnP {ECO:0000313|EMBL:EPR76222.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
polar amino acid ABC transporter inner membrane protein
|
|
S3_scaffold_0_curated_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26961..27830)
|
Putative glutamate transporter glutamate-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHL4_9ACTN
rbh
Putative glutamate transporter glutamate-binding protein {ECO:0000313|EMBL:EAR25220.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
family 3 extracellular solute-binding protein
rbh
|
|
S3_scaffold_0_curated_21
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(27867..28622)
|
Glutamate transport ATP-binding protein gluA n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XB18_9MICO
rbh
Glutamate transport ATP-binding protein gluA {ECO:0000313|EMBL:EPR76224.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
gluA; putative glutamate ABC transporter, ATP-binding protein
rbh
|
|
S3_scaffold_0_curated_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28716..29543)
|
Putaive rRNA methyltransferase id=7719153 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
rbh
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ERK69540.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative rRNA methyltransferase
rbh
|
|
S3_scaffold_0_curated_23
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29566..29958)
|
50S ribosomal protein L20 id=7719154 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
rplT; 50S ribosomal protein L20
|
|
S3_scaffold_0_curated_24
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(29985..30179)
|
50S ribosomal protein L35 n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=RL35_CLAMS
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
|
|
S3_scaffold_0_curated_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(30172..30786)
|
Translation initiation factor IF-3 n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHK9_9ACTN
rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
translation initiation factor IF-3
rbh
|
|
S3_scaffold_0_curated_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
31062..31424
|
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AHK7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR25213.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
|
|
S3_scaffold_0_curated_27
Corynebacterium ammoniagenes, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(31434..33026)
|
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003451E05
rbh
Uncharacterized protein {ECO:0000313|EMBL:EFG81775.1}; TaxID=649754 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium ammoniagenes DSM 20306.;"
putative exporter of polyketide antibiotics
rbh
|
|
S3_scaffold_0_curated_28
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(33023..33928)
|
ABC transporter related protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UGI7_CELFN
rbh
ABC transporter {ECO:0000313|EMBL:KGM12049.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
ABC transporter
rbh
|
|
S3_scaffold_0_curated_29
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(33977..34753)
|
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3A2_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK71943.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
|
|
S3_scaffold_0_curated_30
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(34763..35509)
|
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hisA; phosphoribosyl isomerase A (EC:5.3.1.16)
rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Agromyces subbeticus RepID=UPI0003B52CFE
rbh
|