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S4_scaffold_2106_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_2106_curated_1
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..414)
DNA (414bp) protein (138aa)
DNA-3-methyladenine glycosidase n=1 Tax=Rhizobium loti RepID=UPI00036913FB
HhH-GPD superbase excision DNA repair family protein {ECO:0000313|EMBL:AID32677.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
DNA-3-methyladenine glycosidase II
S4_scaffold_2106_curated_2
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

470..1363
DNA (894bp) protein (298aa)
UPI0003CE9223 related cluster n=1 Tax=unknown RepID=UPI0003CE9223 rbh
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:ESY70440.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain-containing protein rbh
S4_scaffold_2106_curated_3
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2172..2423
DNA (252bp) protein (84aa)
EamA-like transporter family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHW3_MESAW
EamA-like transporter family
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESY96716.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
S4_scaffold_2106_curated_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2393..3241)
DNA (849bp) protein (283aa)
UPI0003CEA490 related cluster n=1 Tax=unknown RepID=UPI0003CEA490 rbh
Ribonuclease BN {ECO:0000313|EMBL:ESY75200.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ribonuclease BN rbh
S4_scaffold_2106_curated_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3301..4167
DNA (867bp) protein (289aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAI9_MESCW rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV10738.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_2106_curated_6
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4192..4383
DNA (192bp) protein (64aa)
Hypoxia induced protein conserved region n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFH6_MESAW
Hypoxia induced protein conserved region
Membrane protein {ECO:0000313|EMBL:ESY84483.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
S4_scaffold_2106_curated_7
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4409..4990
DNA (582bp) protein (194aa)
UPI0003CF3E75 related cluster n=1 Tax=unknown RepID=UPI0003CF3E75 rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ESY96587.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
ATP:cob(I)alamin adenosyltransferase rbh
S4_scaffold_2106_curated_8
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5023..5820
DNA (798bp) protein (266aa)
UPI0003CFC724 related cluster n=1 Tax=unknown RepID=UPI0003CFC724 rbh
Membrane protein {ECO:0000313|EMBL:ESZ26869.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
rhomboid family protein rbh
S4_scaffold_2106_curated_9
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6003..6752
DNA (750bp) protein (250aa)
UPI0003CEAFE0 related cluster n=1 Tax=unknown RepID=UPI0003CEAFE0 rbh
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ESY90399.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
electron transfer flavoprotein subunit beta subunit rbh
S4_scaffold_2106_curated_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6776..7705
DNA (930bp) protein (310aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3H9_9RHIZ rbh
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EHH13687.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
electron transfer flavoprotein subunit alpha rbh
S4_scaffold_2106_curated_11
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7823..8701
DNA (879bp) protein (293aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ26866.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ESZ26866.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAI3_MESCW rbh
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein rbh
S4_scaffold_2106_curated_12
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8746..10668)
DNA (1923bp) protein (641aa)
UPI0003CFB420 related cluster n=1 Tax=unknown RepID=UPI0003CFB420 rbh
Diguanylate cyclase {ECO:0000313|EMBL:ESZ26865.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
diguanylate cyclase rbh
S4_scaffold_2106_curated_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10890..11528)
DNA (639bp) protein (213aa)
UPI0003CFBE6C related cluster n=1 Tax=unknown RepID=UPI0003CFBE6C rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ26864.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein rbh
S4_scaffold_2106_curated_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11530..12081)
DNA (552bp) protein (184aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAI0_MESCW rbh
sigma-70 family RNA polymerase sigma factor rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADV10729.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_2106_curated_15
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12408..13415
DNA (1008bp) protein (336aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAH9_MESCW rbh
family 1 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADV10728.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_2106_curated_16
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13590..15170
DNA (1581bp) protein (527aa)
UPI0003CE03CC related cluster n=1 Tax=unknown RepID=UPI0003CE03CC rbh
Iron ABC transporter permease {ECO:0000313|EMBL:ESY81606.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
ABC-type Fe3+ transport system, permease component rbh
S4_scaffold_2106_curated_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15167..16249
DNA (1083bp) protein (361aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
UPI0003CDEC37 related cluster n=1 Tax=unknown RepID=UPI0003CDEC37 rbh
ABC transporter rbh
S4_scaffold_2106_curated_18
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16303..17112)
DNA (810bp) protein (270aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
metallophosphatase n=1 Tax=Rhizobium loti RepID=UPI00036AC62E rbh
putative phosphohydrolase rbh
S4_scaffold_2106_curated_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17177..17599)
DNA (423bp) protein (141aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
sn-glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI00036FF3AC
ugpC; glycerol-3-phosphate transporter ATP-binding protein
Displaying 19 items

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