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S4_scaffold_1038_curated

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_1038_curated_1
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

338..634
DNA (297bp) protein (99aa)
10 kDa chaperonin 5 n=12 Tax=Mesorhizobium RepID=CH105_RHILO
Chaperonin Cpn10
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
S4_scaffold_1038_curated_2
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

696..2351
DNA (1656bp) protein (552aa)
60 kDa chaperonin n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJG9_MESCW rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
chaperonin GroEL rbh
S4_scaffold_1038_curated_3
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2412..3314)
DNA (903bp) protein (301aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A8T0_BURGB
bacterial regulatory helix-turn-helix, lysR family protein
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFQ63714.1}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens WH6.;"
S4_scaffold_1038_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3446..4309
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q8D0_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM33824.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
permeases rbh
S4_scaffold_1038_curated_5
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4332..4967)
DNA (636bp) protein (212aa)
Regulatory protein TetR n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJH1_MESCW rbh
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:ADV13733.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1038_curated_6
unknown

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comp(5040..5471)
DNA (432bp) protein (144aa)

This feature has no annotations

S4_scaffold_1038_curated_7
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5667..6077
DNA (411bp) protein (137aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJH2_MESCW
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADV13734.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1038_curated_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6115..6564
DNA (450bp) protein (150aa)
peroxiredoxin n=1 Tax=Rhizobium loti RepID=UPI00037FC7D7
Peroxiredoxin osmC {ECO:0000313|EMBL:AID29345.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
osmotically inducible protein OsmC
S4_scaffold_1038_curated_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6579..6965
DNA (387bp) protein (129aa)
Mll8193 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983T0_RHILO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA72426.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
S4_scaffold_1038_curated_10
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6985..7611)
DNA (627bp) protein (209aa)
UPI0003CF3EC0 related cluster n=1 Tax=unknown RepID=UPI0003CF3EC0 rbh
Lysine transporter LysE {ECO:0000313|EMBL:ESY82096.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
putative threonine efflux protein rbh
S4_scaffold_1038_curated_11
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8157..8324)
DNA (168bp) protein (56aa)
UPI0003CE9A7C related cluster n=1 Tax=unknown RepID=UPI0003CE9A7C
Uncharacterized protein {ECO:0000313|EMBL:ESY85611.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
S4_scaffold_1038_curated_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8326..8733)
DNA (408bp) protein (136aa)
UPI0003CEF38C related cluster n=1 Tax=unknown RepID=UPI0003CEF38C
Uncharacterized protein {ECO:0000313|EMBL:ESY66440.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
S4_scaffold_1038_curated_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9306..9554)
DNA (249bp) protein (83aa)
Cold-shock protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F8P5_9RHIZ
Cold-shock protein {ECO:0000313|EMBL:ESX63624.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
cold-shock protein
S4_scaffold_1038_curated_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9986..10681)
DNA (696bp) protein (232aa)
Mlr8183 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983T6_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:ETA72419.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hypothetical protein rbh
S4_scaffold_1038_curated_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10678..10998)
DNA (321bp) protein (107aa)
Transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC05_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EHH10679.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
transcriptional regulator
S4_scaffold_1038_curated_16
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11066..11818)
DNA (753bp) protein (251aa)
Short-chain alcohol dehydrogenase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSF4_MESAW rbh
short-chain alcohol dehydrogenase rbh
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:AGB47018.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S4_scaffold_1038_curated_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11902..12555)
DNA (654bp) protein (218aa)
UPI0003D064ED related cluster n=1 Tax=unknown RepID=UPI0003D064ED rbh
Glutathione S-transferase {ECO:0000313|EMBL:ESZ20650.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
glutathione S-transferase rbh
S4_scaffold_1038_curated_18
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12625..14067)
DNA (1443bp) protein (481aa)
Patatin n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FB82_9RHIZ rbh
Patatin {ECO:0000313|EMBL:ESX63618.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
patatin
S4_scaffold_1038_curated_19
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14228..14407
DNA (180bp) protein (60aa)
Putative stress response protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F958_9RHIZ
Putative stress response protein {ECO:0000313|EMBL:CCV13015.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
S4_scaffold_1038_curated_20
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14458..15126)
DNA (669bp) protein (223aa)
Metallophosphoesterase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJI3_MESCW rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:ADV13745.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1038_curated_21
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15716..16309
DNA (594bp) protein (198aa)
UPI0003CF68F7 related cluster n=1 Tax=unknown RepID=UPI0003CF68F7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY66433.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein rbh
S4_scaffold_1038_curated_22
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16376..16930)
DNA (555bp) protein (185aa)
UPI0003CF5B1E related cluster n=1 Tax=unknown RepID=UPI0003CF5B1E rbh
Transcriptional regulator {ECO:0000313|EMBL:ESY66432.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
TetR family transcriptional regulator rbh
S4_scaffold_1038_curated_23
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17079..17867
DNA (789bp) protein (263aa)
UPI0003D05143 related cluster n=1 Tax=unknown RepID=UPI0003D05143 rbh
NIPSNAP family containing protein {ECO:0000313|EMBL:ESY66431.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
NIPSNAP family containing protein rbh
S4_scaffold_1038_curated_24
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17864..18241)
DNA (378bp) protein (126aa)
UPI0003CF2915 related cluster n=1 Tax=unknown RepID=UPI0003CF2915
Alpha/beta hydrolase {ECO:0000313|EMBL:ESY82084.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
alpha/beta hydrolase fold protein
Displaying 24 items

View Taxonomy