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S4_scaffold_1000_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_1000_curated_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..271)
DNA (270bp) protein (90aa)
UPI0003CEF9EF related cluster n=1 Tax=unknown RepID=UPI0003CEF9EF
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ESY75984.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
S4_scaffold_1000_curated_2
unknown

Not on your lists

comp(429..653)
DNA (225bp) protein (75aa)

This feature has no annotations

S4_scaffold_1000_curated_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

836..2617
DNA (1782bp) protein (594aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Acetolactate synthase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TG94_MESCW rbh
acetolactate synthase large subunit rbh
S4_scaffold_1000_curated_4
unknown

Not on your lists

comp(3429..3539)
DNA (111bp) protein (37aa)

This feature has no annotations

S4_scaffold_1000_curated_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3715..3993
DNA (279bp) protein (93aa)
UPI0003CE617B related cluster n=1 Tax=unknown RepID=UPI0003CE617B
Uncharacterized protein {ECO:0000313|EMBL:CDX13001.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative threonine efflux protein
S4_scaffold_1000_curated_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4198..5463
DNA (1266bp) protein (422aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH42_MESCW rbh
RND family efflux transporter MFP subunit rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV12367.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1000_curated_7
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5540..5734)
DNA (195bp) protein (65aa)
Tax=RBG_13_Deltaproteobacteria_65_10_curated
S4_scaffold_1000_curated_8
unknown

Not on your lists

comp(5840..6298)
DNA (459bp) protein (153aa)

This feature has no annotations

S4_scaffold_1000_curated_9
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6317..6607)
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
S4_scaffold_1000_curated_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6852..8624
DNA (1773bp) protein (591aa)
UPI0003D03C54 related cluster n=1 Tax=unknown RepID=UPI0003D03C54 rbh
Multidrug transporter {ECO:0000313|EMBL:ESZ20372.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
RND efflux transporter rbh
S4_scaffold_1000_curated_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8700..9308
DNA (609bp) protein (203aa)
nitrile hydratase subunit alpha (EC:4.2.1.84) rbh
Nitrile hydratase subunit alpha n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGW9_9RHIZ rbh
Nitrile hydratase subunit alpha {ECO:0000313|EMBL:EHH08499.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
S4_scaffold_1000_curated_12
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9305..9964
DNA (660bp) protein (220aa)
UPI0003CEA0DC related cluster n=1 Tax=unknown RepID=UPI0003CEA0DC rbh
Low-molecular weight cobalt-containing nitrile hydratase subunit beta {ECO:0000313|EMBL:ESY75993.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
nitrile hydratase, beta subunit rbh
S4_scaffold_1000_curated_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9951..10316
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGX1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH08501.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
nitrile hydratase accessory protein
S4_scaffold_1000_curated_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10457..11584
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH47_MESCW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV12372.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1000_curated_15
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11651..12055)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TH48_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV12373.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_1000_curated_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12168..12908
DNA (741bp) protein (247aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
pyridoxal phosphate biosynthetic protein PdxJ (EC:2.6.99.2) rbh
UPI0003CFC3EF related cluster n=1 Tax=unknown RepID=UPI0003CFC3EF rbh
S4_scaffold_1000_curated_17
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12943..13887)
DNA (945bp) protein (315aa)
UPI0003CFAD13 related cluster n=1 Tax=unknown RepID=UPI0003CFAD13
Uncharacterized protein {ECO:0000313|EMBL:ESZ52680.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
potassium uptake protein
S4_scaffold_1000_curated_18
unknown

Not on your lists

comp(14160..14282)
DNA (123bp) protein (41aa)

This feature has no annotations

S4_scaffold_1000_curated_19
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14455..14931
DNA (477bp) protein (159aa)
UPI0003CE5D98 related cluster n=1 Tax=unknown RepID=UPI0003CE5D98 rbh
potassium transporter rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S4_scaffold_1000_curated_20
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14967..16028
DNA (1062bp) protein (354aa)
UPI0003CEA805 related cluster n=1 Tax=unknown RepID=UPI0003CEA805 rbh
CoA reductase {ECO:0000313|EMBL:ESY77934.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
NAD-dependent epimerase/dehydratase rbh
S4_scaffold_1000_curated_21
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16049..16939)
DNA (891bp) protein (297aa)
UPI0003CEBFBA related cluster n=1 Tax=unknown RepID=UPI0003CEBFBA rbh
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:ESZ54823.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
putative nucleoside-diphosphate sugar epimerase rbh
S4_scaffold_1000_curated_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17020..17484
DNA (465bp) protein (155aa)
Mll1412 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98KM1_RHILO
hypothetical protein
Mll1412 protein {ECO:0000313|EMBL:BAB48793.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_1000_curated_23
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17619..18323
DNA (705bp) protein (235aa)
UPI0003CF8E60 related cluster n=1 Tax=unknown RepID=UPI0003CF8E60 rbh
Glutamate synthase {ECO:0000313|EMBL:ESY77937.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
FAD dependent oxidoreductase rbh
Displaying 23 items

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