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S4_scaffold_599_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_599_curated_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..740)
DNA (738bp) protein (246aa)
Extracellular solute-binding protein family 1 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TAH9_MESCW
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADV10728.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_599_curated_2
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1687..2115)
DNA (429bp) protein (143aa)
Propeptide, PepSY amd peptidase M4 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIF3_MOOTA
peptidase
Propeptide, PepSY amd peptidase M4 {ECO:0000313|EMBL:ABC19786.1}; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
S4_scaffold_599_curated_3
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2260..3681)
DNA (1422bp) protein (474aa)
Signal transduction histidine kinase n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q3K2_DESAF rbh
two-component sensor histidine kinase rbh
Tax=CG_Desulfarul_01
S4_scaffold_599_curated_4
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3662..4336)
DNA (675bp) protein (225aa)
Putative transcriptional activator protein CopR n=1 Tax=delta proteobacterium NaphS2 RepID=D8FAI4_9DELT
Putative transcriptional activator protein CopR {ECO:0000313|EMBL:EFK07218.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
OmpR family two-component response regulator
S4_scaffold_599_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4662..5204
DNA (543bp) protein (181aa)
ChrB domain-containing protein n=1 Tax=Afipia birgiae RepID=UPI000371F7F5 rbh
PaaX-like protein {ECO:0000313|EMBL:EJB03369.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
ChrB domain-containing protein
S4_scaffold_599_curated_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5206..6087
DNA (882bp) protein (294aa)
Major facilitator superfamily MFS_1 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EK23_9RHIZ
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCV04707.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
major facilitator superfamily protein
S4_scaffold_599_curated_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6157..9576
DNA (3420bp) protein (1140aa)
cation-transporting ATPase n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003667C6E rbh
P-type HAD superfamily ATPase rbh
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
S4_scaffold_599_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9573..10370
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FF2A6
Putative membrane-associated protein {ECO:0000313|EMBL:EJB03372.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
PA-phosphatase-like phosphoesterase
S4_scaffold_599_curated_9
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10382..11134)
DNA (753bp) protein (251aa)
penicillin-binding protein 1A n=1 Tax=Streptomyces chartreusis RepID=UPI000262FEA5
transglycosylase
Uncharacterized protein {ECO:0000313|EMBL:KGH45635.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
S4_scaffold_599_curated_10
unknown

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comp(11299..11412)
DNA (114bp) protein (38aa)

This feature has no annotations

S4_scaffold_599_curated_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11409..14072)
DNA (2664bp) protein (888aa)
Mll2627 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I04_RHILO rbh
Mll2627 protein {ECO:0000313|EMBL:BAB49712.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
hypothetical protein rbh
S4_scaffold_599_curated_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14104..14997)
DNA (894bp) protein (298aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|RuleBase:RU003802}; EC=2.1.1.77 {ECO:0000256|RuleBase:RU003802};; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003825E3B rbh
S4_scaffold_599_curated_13
unknown

Not on your lists

15236..15958
DNA (723bp) protein (241aa)

This feature has no annotations

S4_scaffold_599_curated_14
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15981..18413)
DNA (2433bp) protein (811aa)
ATPase, E1-E2 type n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q472X6_CUPPJ rbh
ATPase rbh
ATPase, E1-E2 type {ECO:0000313|EMBL:AAZ60557.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
S4_scaffold_599_curated_15
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18410..18844)
DNA (435bp) protein (145aa)
Universal stress protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEF1_BEII9
UspA domain-containing protein
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
S4_scaffold_599_curated_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19258..19512)
DNA (255bp) protein (85aa)
Mlr4467 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E03_RHILO
hypothetical protein
Mlr4467 protein {ECO:0000313|EMBL:BAB51117.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_599_curated_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19693..22344)
DNA (2652bp) protein (884aa)
ABC transporter integral membrane protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E04_RHILO rbh
ABC transporter integral membrane protein {ECO:0000313|EMBL:BAB51116.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
ABC transporter rbh
S4_scaffold_599_curated_18
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22344..23024)
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E05_RHILO rbh
ABC transporter ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAB51115.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_599_curated_19
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23017..23679)
DNA (663bp) protein (221aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E06_RHILO rbh
ABC transporter ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAB51114.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_599_curated_20
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23681..24280)
DNA (600bp) protein (200aa)
Putative lipoprotein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E07_RHILO
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:BAB51113.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_599_curated_21
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24408..25769)
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Sensory histidine protein kinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E08_RHILO
sensory histidine protein kinase
S4_scaffold_599_curated_22
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25762..26460)
DNA (699bp) protein (233aa)
UPI0003D05496 related cluster n=1 Tax=unknown RepID=UPI0003D05496
XRE family transcriptional regulator {ECO:0000313|EMBL:ESZ23131.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
response regulator receiver
S4_scaffold_599_curated_23
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26563..27357)
DNA (795bp) protein (265aa)
Putative integral membrane protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98E10_RHILO rbh
hypothetical protein rbh
Putative integral membrane protein {ECO:0000313|EMBL:BAB51110.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_599_curated_24
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27400..27657)
DNA (258bp) protein (86aa)
UPI0003CE8440 related cluster n=1 Tax=unknown RepID=UPI0003CE8440
Uncharacterized protein {ECO:0000313|EMBL:ESW64363.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
hypothetical protein
S4_scaffold_599_curated_25
unknown

Not on your lists

comp(28332..28589)
DNA (258bp) protein (86aa)

This feature has no annotations

S4_scaffold_599_curated_26
unknown

Not on your lists

comp(29486..29818)
DNA (333bp) protein (111aa)

This feature has no annotations

S4_scaffold_599_curated_27
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30098..30460
DNA (363bp) protein (121aa)
Propeptide PepSY amd peptidase M4 n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C7E7_STRBB
Uncharacterized protein {ECO:0000313|EMBL:KKC31838.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
propeptide PepSY amd peptidase M4
S4_scaffold_599_curated_28
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30655..30882)
DNA (228bp) protein (76aa)
Msl4971 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CW6_RHILO
Putative membrane protein {ECO:0000313|EMBL:AID33841.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
S4_scaffold_599_curated_29
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30879..31226)
DNA (348bp) protein (116aa)
UPI0003CDD933 related cluster n=1 Tax=unknown RepID=UPI0003CDD933
Membrane protein {ECO:0000313|EMBL:ESY83805.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
Displaying 29 items

View Taxonomy