ggKbase home page

S4_scaffold_870_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4_scaffold_870_curated_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131..298
DNA (168bp) protein (56aa)
UPF0391 membrane protein Mesci_1430 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8D4_MESCW
hypothetical protein
UPF0391 membrane protein X734_13760 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
S4_scaffold_870_curated_2
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

482..1513
DNA (1032bp) protein (344aa)
UPI0003CE1D98 related cluster n=1 Tax=unknown RepID=UPI0003CE1D98 rbh
Histidine kinase {ECO:0000313|EMBL:ESY75362.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
HWE histidine kinase rbh
S4_scaffold_870_curated_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1958..2284
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8D1_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10587.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_870_curated_4
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2368..2613
DNA (246bp) protein (82aa)
UPI0003CE15E3 related cluster n=1 Tax=unknown RepID=UPI0003CE15E3
Uncharacterized protein {ECO:0000313|EMBL:ESY75364.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
S4_scaffold_870_curated_5
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2710..4332)
DNA (1623bp) protein (541aa)
UPI0003CFA007 related cluster n=1 Tax=unknown RepID=UPI0003CFA007 rbh
Histidine kinase {ECO:0000313|EMBL:ESZ26730.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
CHASE domain-containing protein rbh
S4_scaffold_870_curated_6
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4588..5385)
DNA (798bp) protein (266aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EZT4_9RHIZ rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ11697.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
ABC transporter rbh
S4_scaffold_870_curated_7
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5401..6753)
DNA (1353bp) protein (451aa)
ABC-type xylose transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KG00_MESAW rbh
ABC-type xylose transport system, permease component rbh
ABC-type xylose transport system, permease component {ECO:0000313|EMBL:AGB43926.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S4_scaffold_870_curated_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6898..7938)
DNA (1041bp) protein (347aa)
D-xylose ABC transporter, periplasmic substrate-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8C6_MESCW rbh
D-xylose ABC transporter periplasmic substrate-binding protein rbh
D-xylose ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:ADV10582.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_870_curated_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8291..9538
DNA (1248bp) protein (416aa)
Xyl repressor n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FL8_RHILO rbh
xyl repressor rbh
Xyl repressor {ECO:0000313|EMBL:BAB50549.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_870_curated_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9555..10244)
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=4 Tax=Mesorhizobium RepID=E8T8C4_MESCW rbh
phosphate regulon transcriptional regulatory protein PhoB rbh
Two component transcriptional regulator PhoB, winged helix family {ECO:0000313|EMBL:AEH85924.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S4_scaffold_870_curated_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10264..10971)
DNA (708bp) protein (236aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98FL6_RHILO rbh
phosphate uptake regulatory protein PhoU rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_870_curated_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10997..11791)
DNA (795bp) protein (265aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
phosphate ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI000371878E rbh
phosphate ABC transporter ATP-binding protein rbh
S4_scaffold_870_curated_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11797..12648)
DNA (852bp) protein (284aa)
UPI0003CE72AE related cluster n=1 Tax=unknown RepID=UPI0003CE72AE rbh
Phosphate transporter permease subunit PtsA {ECO:0000313|EMBL:ESY75375.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
phosphate ABC transporter, permease protein PstA rbh
S4_scaffold_870_curated_14
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12652..13635)
DNA (984bp) protein (328aa)
UPI0003CF5A97 related cluster n=1 Tax=unknown RepID=UPI0003CF5A97 rbh
Phosphate transporter permease subunit PstC {ECO:0000313|EMBL:ESY75376.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
phosphate ABC transporter permease rbh
S4_scaffold_870_curated_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13702..14757)
DNA (1056bp) protein (352aa)
Phosphate-binding protein PstS n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=PSTS_RHILO rbh
phosphate-binding protein rbh
Phosphate-binding protein PstS; Short=PBP;; Flags: Precursor;; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S4_scaffold_870_curated_16
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15267..19904)
DNA (4638bp) protein (1546aa)
PAS sensor protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8B8_MESCW rbh
PAS sensor protein {ECO:0000313|EMBL:ADV10574.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
PAS sensor protein rbh
S4_scaffold_870_curated_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20023..20364
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7G8_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV10573.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S4_scaffold_870_curated_18
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20398..20634)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFZ1_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB43916.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S4_scaffold_870_curated_19
unknown

Not on your lists

20963..21028
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 19 items

View Taxonomy