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S5_scaffold_296_curated

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Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_296_curated_1
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..454
DNA (453bp) protein (151aa)
Glycosyltransferase n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q2W0_DESAF
group 1 glycosyl transferase
Glycosyltransferase {ECO:0000313|EMBL:EMG38816.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
S5_scaffold_296_curated_2
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

451..1041
DNA (591bp) protein (197aa)
Phosphoglycerate mutase n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VSF9_DESAO
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADU64302.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
S5_scaffold_296_curated_3
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..2368
DNA (1164bp) protein (388aa)
Glycosyltransferase 28 domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FHJ8_DESAA rbh
glycosyl transferase family protein rbh
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:ACL02286.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
S5_scaffold_296_curated_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2388..3182
DNA (795bp) protein (265aa)
Putative uncharacterized protein id=2264837 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
polysaccharide deacetylase
Tax=GWB2_Desulfobacterales_56_26_curated
S5_scaffold_296_curated_5
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3351..3650)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XIU3_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH74107.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_296_curated_6
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3659..3937)
DNA (279bp) protein (93aa)
Addiction module antidote protein, CC2985 family n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C277_NITHN
addiction module antidote protein
Addiction module antidote protein, CC2985 family {ECO:0000313|EMBL:ADE16665.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
S5_scaffold_296_curated_7
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..6027)
DNA (1911bp) protein (637aa)
Chaperone protein DnaK n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JX90_DESFR rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
dnaK; molecular chaperone DnaK rbh
S5_scaffold_296_curated_8
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6197..6727)
DNA (531bp) protein (177aa)
Protein GrpE n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQ64_DESMR
grpE; protein GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_296_curated_9
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6797..7837)
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQ65_DESMR rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hrcA; heat-inducible transcription repressor HrcA rbh
S5_scaffold_296_curated_10
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7901..9148)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XQM5_DESMR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH77759.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_296_curated_11
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9542..10258)
DNA (717bp) protein (239aa)
Dual specificity protein phosphatase n=1 Tax=Desulfovibrio sp. X2 RepID=S7VH88_9DELT
Dual specificity protein phosphatase {ECO:0000313|EMBL:EPR43853.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
dual specificity protein phosphatase
S5_scaffold_296_curated_12
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(10326..11561)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Acinetobacter calcoaceticus RepID=UPI0002E4BA05
Uncharacterized protein {ECO:0000313|EMBL:KIJ78305.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
S5_scaffold_296_curated_13
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12138..14588
DNA (2451bp) protein (817aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
Histidine kinase,histidine kinase n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q4Z3_9DELT rbh
two-component sensor histidine kinase rbh
S5_scaffold_296_curated_14
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14575..15972
DNA (1398bp) protein (466aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q4Z4_9DELT rbh
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIG54850.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
response regulator rbh
S5_scaffold_296_curated_15
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16122..17528
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZI0_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL50227.1}; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
S5_scaffold_296_curated_16
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17601..18965
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JZI0_DESFR rbh
Uncharacterized protein {ECO:0000313|EMBL:EFL50227.1}; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein rbh
S5_scaffold_296_curated_17
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19055..19939)
DNA (885bp) protein (295aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EMG36762.1}; EC=1.1.1.133 {ECO:0000313|EMBL:EMG36762.1};; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Desulfovibrio africanus PCS RepID=M5PQW4_DESAF rbh
dTDP-4-dehydrorhamnose reductase rbh
S5_scaffold_296_curated_18
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19936..20958)
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GVE9_9DELT rbh
rmlB; dTDP-glucose 4,6-dehydratase rbh
S5_scaffold_296_curated_trna_1
unknown

Not on your lists

21133..21205
DNA (73bp)
transferRNA Val
S5_scaffold_296_curated_19
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21250..21726
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z410_DESAF
tRNA/rRNA methyltransferase SpoU
S5_scaffold_296_curated_20
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22073..23644
DNA (1572bp) protein (524aa)
Methyl-accepting chemotaxis sensory transducer with Cache/Pas/Pac sensor n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q0Q0_DESAF
Methyl-accepting chemotaxis sensory transducer with Cache/Pas/Pac sensor {ECO:0000313|EMBL:EMG36891.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
S5_scaffold_296_curated_21
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23657..23986)
DNA (330bp) protein (110aa)
HicB family protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JR89_DESFR
HicB family protein {ECO:0000313|EMBL:EFL53090.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
S5_scaffold_296_curated_22
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23983..24303)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JR88_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL53089.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
S5_scaffold_296_curated_23
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24422..25348
DNA (927bp) protein (309aa)
cobalamin biosynthesis protein CobD n=1 Tax=Desulfovibrio longus RepID=UPI0003B7420B rbh
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
cobalamin biosynthesis protein CbiB rbh
S5_scaffold_296_curated_24
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25453..25659
DNA (207bp) protein (69aa)
Cold shock protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GNK8_9DELT
Cold shock protein {ECO:0000313|EMBL:EKO38556.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
cspC; cold-shock domain family protein
S5_scaffold_296_curated_25
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25876..26676)
DNA (801bp) protein (267aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3Z419_DESAF rbh
pyrroline-5-carboxylate reductase rbh
S5_scaffold_296_curated_26
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26681..27097)
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WSM2_9DELT
S5_scaffold_296_curated_27
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27253..28047)
DNA (795bp) protein (265aa)
ABC transporter related protein n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X4V0_DESRD rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ACV69447.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
S5_scaffold_296_curated_28
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28047..28931)
DNA (885bp) protein (295aa)
Putative ABC-type transporter, integral membrane subunit n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GEG1_DESGI rbh
putative ABC-type transporter, integral membrane subunit rbh
Putative ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AGW14990.1}; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
S5_scaffold_296_curated_29
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29442..30389)
DNA (948bp) protein (316aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Desulfovibrio africanus PCS RepID=M5PRQ0_DESAF rbh
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:EMG36750.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
ABC transporter substrate binding protein rbh
Displaying items 1-30 of 62 in total

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