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S5_scaffold_568_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_568_curated_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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1..2676
DNA (2676bp) protein (892aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035FEAD4 rbh
two-component hybrid sensor and regulator rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S5_scaffold_568_curated_2
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2769..3644
DNA (876bp) protein (292aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Release factor glutamine methyltransferase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QCZ4_9DELT rbh
hemK; protein methyltransferase hemK rbh
S5_scaffold_568_curated_3
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3792..5261
DNA (1470bp) protein (490aa)
Spermine synthase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHX1_SYNFM rbh
spermine synthase rbh
Spermine synthase {ECO:0000313|EMBL:ABK17023.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
S5_scaffold_568_curated_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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5267..5764
DNA (498bp) protein (166aa)
SEC-C motif domain protein id=3738458 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
S5_scaffold_568_curated_trna_1
unknown

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5838..5911
DNA (74bp)
transferRNA Met
S5_scaffold_568_curated_5
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6796..7776
DNA (981bp) protein (327aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FHB5_9DELT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH74360.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_568_curated_6
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7760..9742
DNA (1983bp) protein (661aa)
HAMP domain-containing protein,cache domain-containing protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q4I2_9DELT rbh
HAMP domain-containing protein,cache domain-containing protein {ECO:0000313|EMBL:EIG54688.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
phosphatase rbh
S5_scaffold_568_curated_7
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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9864..11726
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XLA3_DESMR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH77042.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
S5_scaffold_568_curated_8
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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11848..15978
DNA (4131bp) protein (1377aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QA02_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ47832.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein rbh
S5_scaffold_568_curated_9
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16045..16953)
DNA (909bp) protein (303aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; Flags: Precursor;; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
Protoheme IX farnesyltransferase n=1 Tax=Desulfovibrio sp. X2 RepID=S7TVX3_9DELT rbh
protoheme IX farnesyltransferase rbh
S5_scaffold_568_curated_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16920..17243)
DNA (324bp) protein (108aa)
Cytochrome o ubiquinol oxidase subunit IV n=1 Tax=Desulfovibrio sp. X2 RepID=S7TVV4_9DELT
Cytochrome O ubiquinol oxidase subunit IV {ECO:0000313|EMBL:KHK03389.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
cyoD; cytochrome o ubiquinol oxidase subunit IV
S5_scaffold_568_curated_11
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17244..17843)
DNA (600bp) protein (200aa)
Cytochrome o ubiquinol oxidase, subunit III n=1 Tax=Desulfovibrio sp. X2 RepID=S7V9J3_9DELT
Cytochrome o ubiquinol oxidase, subunit III {ECO:0000313|EMBL:EPR41178.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
cyoC; cytochrome o ubiquinol oxidase subunit III
S5_scaffold_568_curated_12
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17905..19872)
DNA (1968bp) protein (656aa)
Cytochrome o ubiquinol oxidase, subunit I n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6G2_9DELT rbh
Cytochrome O ubiquinol oxidase subunit I {ECO:0000313|EMBL:KHK03391.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
cyoB; cytochrome o ubiquinol oxidase subunit I rbh
S5_scaffold_568_curated_13
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19894..20793)
DNA (900bp) protein (300aa)
Ubiquinol oxidase, subunit II n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6G1_9DELT rbh
Cytochrome O ubiquinol oxidase subunit II {ECO:0000313|EMBL:KHK03392.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
cyoA; cytochrome o ubiquinol oxidase subunit II rbh
S5_scaffold_568_curated_14
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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20994..21347
DNA (354bp) protein (118aa)
Transcriptional regulator, ArsR family id=4029115 bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
ArsR family transcriptional regulator
Tax=GWC2_Syntrophus_56_31_curated
S5_scaffold_568_curated_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21350..22489
DNA (1140bp) protein (380aa)
Permease n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JTD0_DESFR
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
S5_scaffold_568_curated_16
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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22506..22739
DNA (234bp) protein (78aa)
Redox-active disulfide protein 2 n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BW60_DESAD
redox-active disulfide protein 2
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_568_curated_17
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22757..23149
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPB7_SYNFM
hypothetical protein
Tax=BJP_IG2102_Desulfovibrionales_64_25
S5_scaffold_568_curated_18
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23149..23520
DNA (372bp) protein (124aa)
Thioredoxin domain-containing protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5G1_9DELT
Thioredoxin domain-containing protein {ECO:0000313|EMBL:EHJ48962.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
trxA; thioredoxin
S5_scaffold_568_curated_19
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23533..24240
DNA (708bp) protein (236aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q5G2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KHK00305.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
thiol:disulfide interchange protein rbh
S5_scaffold_568_curated_20
unknown

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24322..24450
DNA (129bp) protein (43aa)

This feature has no annotations

S5_scaffold_568_curated_21
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25176..26639
DNA (1464bp) protein (488aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q9H6_9DELT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EHJ48616.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
putative methyl-accepting chemotaxis protein
Displaying 22 items

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