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S5_scaffold_367_curated

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_367_curated_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..285)
DNA (285bp) protein (95aa)
Allophanate hydrolase subunit 2 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIC1_9MICO
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:CDJ99854.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
allophanate hydrolase subunit 2
S5_scaffold_367_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(282..1673)
DNA (1392bp) protein (464aa)
folylpolyglutamate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FC276 rbh
FolC bifunctional protein {ECO:0000313|EMBL:CDJ99855.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
folylpolyglutamate synthase rbh
S5_scaffold_367_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1670..5122)
DNA (3453bp) protein (1151aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Isoleucine--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AM02_9MICO rbh
ileS; isoleucyl-tRNA synthetase rbh
S5_scaffold_367_curated_4
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5653..6105
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00035C7C51
Uncharacterized protein {ECO:0000313|EMBL:KGN36049.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
S5_scaffold_367_curated_5
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6241..7527
DNA (1287bp) protein (429aa)
Two-component sensor histidine kinase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD6_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN34403.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
integral membrane sensor signal transduction histidine kinase rbh
S5_scaffold_367_curated_6
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7524..8159
DNA (636bp) protein (212aa)
Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGN35902.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
two component LuxR family transcriptional regulator
S5_scaffold_367_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8169..8828
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CCF64
Uncharacterized protein {ECO:0000313|EMBL:CDJ99857.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_367_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8834..9412
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9L6_9MICO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDJ99858.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
N-acetyltransferase GCN5
S5_scaffold_367_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9375..10235)
DNA (861bp) protein (287aa)
DNA helicase n=1 Tax=Agromyces italicus RepID=UPI0003B7860A rbh
Superfamily I DNA and RNA helicase or helicase subunit protein (Modular protein) {ECO:0000313|EMBL:CDJ99859.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
superfamily I DNA and RNA helicase and helicase subunits
S5_scaffold_367_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10475..13042
DNA (2568bp) protein (856aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Valine--tRNA ligase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE50_MICTS rbh
valS; valyl-tRNA synthetase rbh
S5_scaffold_367_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13044..13292
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F9D40D
Fe-S oxidoreductase {ECO:0000313|EMBL:CDJ99861.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Fe-S oxidoreductase
S5_scaffold_367_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13337..15394
DNA (2058bp) protein (686aa)
Peptidyl-dipeptidase dcp {ECO:0000313|EMBL:CDJ99862.1}; EC=3.4.15.5 {ECO:0000313|EMBL:CDJ99862.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
peptidase M3 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371E231 rbh
Zn-dependent oligopeptidase rbh
S5_scaffold_367_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15591..16859)
DNA (1269bp) protein (423aa)
ATP-dependent protease n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373AAA2 rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
clpX; ATP-dependent protease Clp, ATPase subunit rbh
S5_scaffold_367_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16972..17658)
DNA (687bp) protein (229aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium yannicii RepID=UPI000300B153 rbh
clpP2; protease subunit of ATP-dependent Clp protease rbh
S5_scaffold_367_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17690..18274)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE42_MICTS rbh
clpP; protease subunit of ATP-dependent Clp protease rbh
S5_scaffold_367_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18735..20225)
DNA (1491bp) protein (497aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
trigger factor n=1 Tax=Microbacterium yannicii RepID=UPI0002D407BC rbh
tig; FKBP-type peptidyl-prolyl cis-trans isomerase rbh
S5_scaffold_367_curated_trna_2
unknown

Not on your lists

comp(20297..20370)
DNA (74bp)
transferRNA Pro
S5_scaffold_367_curated_trna_1
unknown

Not on your lists

20638..20708
DNA (71bp)
transferRNA Gly
S5_scaffold_367_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20892..21428)
DNA (537bp) protein (179aa)
anhydrase n=1 Tax=Microbacterium yannicii RepID=UPI0002F56CB9
Uncharacterized protein {ECO:0000313|EMBL:CDK00829.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
S5_scaffold_367_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21499..23604)
DNA (2106bp) protein (702aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373821F rbh
Acyltransferase 3 {ECO:0000313|EMBL:CDK00828.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
acyltransferase 3 rbh
S5_scaffold_367_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23807..24292
DNA (486bp) protein (162aa)
DNA-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344FD1B
DNA-binding ferritin-like protein {ECO:0000313|EMBL:CDK00827.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA-binding ferritin-like protein
S5_scaffold_367_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24448..25956)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000301B684 rbh
Amidohydrolase 3 {ECO:0000313|EMBL:CDK00826.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
metal-dependent hydrolase with the TIM-barrel fold rbh
S5_scaffold_367_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25953..26672)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000310C413 rbh
Transcriptional regulator {ECO:0000313|EMBL:CDK00825.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator rbh
S5_scaffold_367_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26707..27720)
DNA (1014bp) protein (338aa)
DNA glycosylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037BC845 rbh
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:CDK00824.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
formamidopyrimidine-DNA glycosylase rbh
S5_scaffold_367_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27720..28277)
DNA (558bp) protein (186aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CDK00823.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CDK00823.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Ribose 5-phosphate isomerase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A3C7_9MICO rbh
ribose 5-phosphate isomerase RpiB
S5_scaffold_367_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28359..29561)
DNA (1203bp) protein (401aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ferrochelatase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A3A60 rbh
hemH; protoheme ferro-lyase rbh
S5_scaffold_367_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29660..30523
DNA (864bp) protein (288aa)
NAD-dependent protein deacetylase 1 {ECO:0000313|EMBL:CDK00821.1}; EC=3.5.1.- {ECO:0000313|EMBL:CDK00821.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NAD-dependent deacetylase n=1 Tax=Microbacterium yannicii RepID=UPI0002E585BC rbh
NAD-dependent protein deacetylase, SIR2 family rbh
S5_scaffold_367_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30547..31176
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AA51_9MICO
Phosphoglycerate mutase {ECO:0000313|EMBL:CDK00820.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
fructose-2,6-bisphosphatase
S5_scaffold_367_curated_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31222..33072
DNA (1851bp) protein (617aa)
phospholipase C 2 precursor (EC:3.1.4.3)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000362569E rbh
Phosphoesterase family protein {ECO:0000313|EMBL:CDK00819.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_367_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33175..33648
DNA (474bp) protein (158aa)
AsnC family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003647866
Transcriptional regulator {ECO:0000313|EMBL:CDK00818.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator
Displaying items 1-30 of 50 in total

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